WormBase Tree Display for Sequence: T05A6

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T05A6	DNA	T05A6	30392
	SMap	S_child	Gene_child	WBGene00005809	23800	25087
				WBGene00200495	10996	11127
				WBGene00197798	12522	12724
				WBGene00199964	13629	13484
				WBGene00197233	4769	4629
				WBGene00000517	14892	18674
				WBGene00198801	13419	13216
				WBGene00198053	6594	6752
				WBGene00201263	11240	11038
				WBGene00000516	9633	10498
				WBGene00220058	26259	26467
				WBGene00011458	20947	18726
				WBGene00199606	7596	7802
				WBGene00201267	13886	14092
				WBGene00011459	21142	23589
				WBGene00195775	11722	11871
				WBGene00196727	4613	4769
				WBGene00199236	13449	13660
				WBGene00173840	4318	4338
			CDS_child	T05A6.1	9652	10263
				T05A6.2:wp85	15101	16655
				T05A6.2a	15101	16655
				T05A6.2b	15101	16655
				T05A6.2c	15101	18265
				T05A6.4	20947	18726
				T05A6.4:wp253	20947	18698
				T05A6.5:wp106	21404	25087
				T05A6.5:wp198	21404	23589
				T05A6.6	23800	25087
				T05A6.6:wp234	23800	25087
				RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g149_x16_II_p	15218	15546
				RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g107n11_x16_II_p	15101	16652
				RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g91_x16_II_p	9742	10260
				RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g62n11_x16_II_p	15101	16652
				RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g90n11_x16_II_p	15221	18262
				RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g207_x16_II_p	10027	10260
				RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g53n11_x16_II_p	9652	10260
				RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g59n11_x16_II_p	15218	16652
				RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g102n11_x16_II_p	15101	18262
				RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g19n11_x16_II_p	9652	10260
				RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g56_x16_II_p	15446	16652
				RNASEQ_embryo_him-8_20dC_post-L1_g163_x16_II_p	15101	16652
				RNASEQ_embryo_him-8_20dC_post-L1_g5n11_x16_II_p	9652	10260
				RNASEQ_embryo_him-8_20dC_post-L1_g98n11_x16_II_p	15221	15546
				RNASEQ_embryo_him-8_20dC_post-L1_g111_x16_II_p	18040	18302
				RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g50_x16_II_p	18207	18262
				RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g111_x16_II_p	15101	16652
				RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g48_x16_II_p	15221	15546
				RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g80n11_x16_II_p	9652	10260
				RNASEQ_L4_soma_JK1107_no_DNaseI_g198_x16_II_p	15101	15175
				RNASEQ_L4_soma_JK1107_no_DNaseI_g144_x16_II_p	15446	16652
				RNASEQ_L4_soma_JK1107_no_DNaseI_g48n11_x16_II_p	9652	10260
				RNASEQ_L4_soma_JK1107_no_DNaseI_g107_x16_II_p	1547	1575
				RNASEQ_L4_soma_JK1107_no_DNaseI_g128_x16_II_p	10557	11539
				RNASEQ_L4_soma_JK1107_no_DNaseI_g80n11_x16_II_m	16485	15319
				RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g81n11_x16_II_p	18207	18262
				RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g121n11_x16_II_p	15590	16652
				RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g114n11e3k111_x16_II_p	15101	15764
				RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g78n11e3k111_x16_II_p	15221	15546
				RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g39n11_x16_II_p	9652	10260
				RNASEQ_early_embryo_g103_x16_II_p	18040	18314
				RNASEQ_early_embryo_g67n11_x16_II_p	15221	15546
				RNASEQ_early_embryo_g117n11_x16_II_p	15101	16652
				RNASEQ_early_embryo_g117n11e3k259_x16_II_p	15590	15818
				RNASEQ_early_embryo_g117n11s3k158_x16_II_p	16296	16453
				RNASEQ_early_embryo_g50n11_x16_II_p	9652	10260
				RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g65_x16_II_p	15221	18262
				RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g126_x16_II_p	15101	16652
				RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g27n11_x16_II_p	9652	10260
				RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g117_x16_II_p	18040	18314
				RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g126e4k51_x16_II_p	15590	15707
				RNASEQ_mid-L1_20dC_4hrs_post-L1_g96_x16_II_p	16291	16652
				RNASEQ_mid-L1_20dC_4hrs_post-L1_g95_x16_II_p	15254	18262
				RNASEQ_mid-L1_20dC_4hrs_post-L1_g59n11_x16_II_p	9652	10260
				RNASEQ_mid-L1_20dC_4hrs_post-L1_g168_x16_II_p	15101	15166
				RNASEQ_mid-L1_20dC_4hrs_post-L1_g149e4k174_x16_II_p	15101	15818
				RNASEQ_mid-L2_25dC_14hrs_post-L1_g19n11_x16_II_p	9652	10260
				RNASEQ_mid-L2_25dC_14hrs_post-L1_g103_x16t1_II_p	15254	16652
				RNASEQ_mid-L3_25dC_25hrs_post-L1_g148n11_x16_II_p	15101	16652
				RNASEQ_mid-L3_25dC_25hrs_post-L1_g185_x16_II_p	15218	15546
				RNASEQ_mid-L3_25dC_25hrs_post-L1_g86_x16_II_p	9742	10260
				RNASEQ_mid-L4_25dC_36hrs_post-L1_g66_x16_II_p	15254	16652
				RNASEQ_mid-L4_25dC_36hrs_post-L1_g176_x16_II_p	15101	15148
				RNASEQ_mid-L4_25dC_36hrs_post-L1_g96_x16_II_p	9742	10260
				RNASEQ_Adult_Harposporium_exposed_2_24hrs_g105n11s3k51_x16_II_p	16296	16453
				RNASEQ_Adult_Harposporium_exposed_2_24hrs_g66n11_x16_II_p	9652	10260
				RNASEQ_Adult_Harposporium_exposed_2_24hrs_g210_x16_II_p	15218	15546
				RNASEQ_Adult_Harposporium_exposed_2_24hrs_g105n11e3k52_x16_II_p	15590	15707
				RNASEQ_Adult_Harposporium_exposed_2_24hrs_g105n11_x16_II_p	15101	16652
				RNASEQ_Adult_Harposporium_exposed_2_24hrs_g98_x25_II_p	16898	17262
				RNASEQ_Adult_Harposporium_exposed_2_24hrs_g78_x25_II_p	3011	8045
				RNASEQ_Adult_Harposporium_exposed_2_24hrs_g103n11_x25_II_p	1334	1784
				RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g146_x16_II_p	15101	16652
				RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g71n11_x16_II_p	15221	15546
				RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g39n11_x16_II_p	9652	10260
				RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g83n11_x16_II_p	9652	10260
				RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g85n11_x16_II_p	16296	16453
				RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g216_x16_II_p	15101	16652
				RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g179_x16_II_p	2464	2501
				RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g120_x16_II_m	7052	5898
				RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g30n11_x16_II_p	8925	11539
				RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g95n11_x16_II_p	8925	8988
				RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g43_x16_II_m	18316	17308
				RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g149_x16_II_m	23007	22806
				RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g218_x16_II_m	23710	23573
				RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g40n11_x16_II_m	8095	7137
				RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g54n11_x16_II_p	9652	10260
				RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g73n11_x16_II_p	15221	18262
				RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g202_x16_II_p	15101	16652
				RNASEQ_Young_Adult_25dC_46hrs_post-L1_g106_x16_II_p	9742	10260
				RNASEQ_Young_Adult_25dC_46hrs_post-L1_g67n11_x16t1_II_p	15221	18262
				RNASEQ_Young_Adult_25dC_46hrs_post-L1_g48n11_x16t1_II_p	15101	16652
				T05A6.gc1	9652	10263
				T05A6.gc2	15101	16655
				T05A6.gc3	20929	17754
				T05A6.gc4	22759	27146
				ContigII.elegans.jigsaw.2028.mRNA2028	23755	25259
				ContigII.elegans.jigsaw.2024.mRNA2024	9585	10495
				ContigII.elegans.jigsaw.2027.mRNA2027	21335	23629
				ContigII.elegans.jigsaw.2025.mRNA2025	15055	16765
				ContigII.elegans.jigsaw.2026.mRNA2026	21004	17601
				AG1201_RIT2P.1398.T1	4045	4221
				AG1201_T05A6.1.T2	9601	10263
				AG1201_T05A6.1.T1	9652	10263
				AG1201_T05A6.2.T1	15101	16655
				AG1201_T05A6.2.T2	15101	16655
				AG1201_T05A6.2.T4	15101	18265
				AG1201_RIT2M.1749.T1	17199	17065
				AG1201_T05A6.4.T1	20947	18726
				AG1201_T05A6.2.T5	18820	18879
				AG1201_RIT2P.1214.T1	24986	25087
				AG1201_RIT2P.1321.T2	26346	26953
				AG1201_RIT2P.1321.T1	26676	26994
			Transcript	T05A6.7	4318	4338
				T05A6.8	11722	11871
				T05A6.9	4613	4769
				T05A6.10	4769	4629
				T05A6.11	12522	12724
				T05A6.12	6594	6752
				T05A6.13	13419	13216
				T05A6.14	13449	13660
				T05A6.15	7596	7802
				T05A6.16	13629	13484
				T05A6.17	10996	11127
				T05A6.18	11240	11038
				T05A6.19	13886	14092
				T05A6.20	26259	26467
				T05A6.1.1	9633	10498
				T05A6.2a.1	14892	18674
				T05A6.2a.2	15054	18674
				T05A6.2b.1	14893	18669
				T05A6.2b.2	15071	18671
				T05A6.2c.1	15083	18668
				T05A6.4.1	20947	18726
				T05A6.6.1	23800	25087
			Pseudogene	T05A6.5	21142	23589
				T05A6.6:wp229	23800	25087
			Nongenomic	yk374f4	15286	18264
				[cgc5260]:cki-1	9631	10494
			PCR_product	cenix:119-c4	21422	22033
				cenix:167-a1	14392	15423
				cenix:167-b1	19870	20868
				cenix:209-d6	8897	10628
				mv_T05A6.1	9653	10261
				mv_T05A6.2	15102	16653
				mv_T05A6.4	18700	20946
				mv_T05A6.5	21405	25085
				p_T05A6.1_93	7651	9651
				sjj_T05A6.1	9300	10768
				sjj_T05A6.2	14764	16746
				sjj_T05A6.4	18733	19916
				sjj_T05A6.5	21377	23648
			Allele	WBVar00746421	17435	17435
				WBVar00746422	17573	17573
				WBVar00370886	216	216
				WBVar00746423	17680	17680
				WBVar00370887	713	713
				WBVar00746424	17878	17878
				WBVar00370888	1203	1203
				WBVar00746425	17974	17974
				WBVar00746426	18003	18003
				WBVar00370889	1336	1336
				WBVar00370890	1627	1627
				WBVar00746427	18091	18091
				WBVar00746428	18210	18210
				WBVar00370891	2550	2550
				WBVar00370892	2572	2572
				WBVar00746429	18244	18244
				WBVar00370893	3417	3417
				WBVar00746430	18273	18273
				WBVar00370894	4370	4370
				WBVar00746431	18434	18434
				WBVar00370895	4371	4371
				WBVar00746432	18468	18468
				WBVar00746433	18611	18611
				WBVar00370896	4488	4488
				WBVar00265366	25351	25352
				WBVar00746434	18675	18675
				WBVar00370897	4652	4652
				WBVar00370898	4889	4889
				WBVar00746435	18734	18734
				WBVar00746436	18761	18761
				WBVar00370899	5371	5371
				WBVar00370900	5993	5993
				WBVar00746437	19098	19098
				WBVar00370901	6232	6232
				WBVar00746438	19550	19550
				WBVar00746439	19564	19564
				WBVar00370902	6589	6589
				WBVar00746440	19657	19657
				WBVar00370903	7292	7292
				WBVar00370904	8078	8078
				WBVar00746441	19692	19692
				WBVar00746442	20006	20006
				WBVar00370905	8425	8425
				WBVar00370906	8867	8867
				WBVar00746443	20097	20097
				WBVar01626751	1578	1578
				WBVar00370907	9451	9451
				WBVar01538298	22054	22054
				WBVar00746444	20155	20155
				WBVar00746445	20747	20747
				WBVar00370908	10018	10018
				WBVar01626752	1660	1660
				WBVar01538299	25375	25375
				WBVar01626753	2186	2186
				WBVar01405307	18344	18345
				WBVar00746446	21611	21611
				WBVar00370909	10624	10624
				WBVar00746447	21809	21809
				WBVar01626754	4057	4057
				WBVar00370910	12085	12085
				WBVar00370911	12338	12338
				WBVar01626755	4358	4358
				WBVar00746448	22084	22084
				WBVar00173640	757	757
				WBVar01308224	7724	7724
				WBVar00746449	22138	22138
				WBVar01626756	5930	5930
				WBVar00370912	12481	12481
				WBVar00370913	13924	13924
				WBVar00746450	22185	22185
				WBVar01626757	8587	8587
				WBVar00173641	1270	1270
				WBVar01626758	10519	10519
				WBVar00173642	4816	4816
				WBVar00370914	14343	14343
				WBVar00746451	22192	22192
				WBVar00370915	14525	14525
				WBVar00173643	5139	5139
				WBVar00746452	22456	22456
				WBVar01626759	10735	10735
				WBVar00746453	22896	22896
				WBVar00173645	5888	5888
				WBVar01626760	18356	18356
				WBVar00370916	14565	14565
				WBVar01626761	24176	24176
				WBVar01655359	13296	13296
				WBVar00173646	6922	6922
				WBVar00746454	22913	22913
				WBVar00370917	15066	15066
				WBVar00173647	7308	7308
				WBVar00370918	15482	15482
				WBVar00746455	22922	22922
				WBVar01626762	24384	24384
				WBVar00746456	23403	23403
				WBVar00173648	7581	7581
				WBVar00370919	16739	16739
				WBVar01626763	26388	26388
				WBVar00746457	23495	23495
				WBVar01626764	27081	27081
				WBVar00173649	7903	7903
				WBVar00370920	17062	17062
				WBVar00746458	23641	23641
				WBVar00370921	17301	17301
				WBVar00173650	8408	8408
				WBVar00173651	8492	8492
				WBVar00746459	23840	23840
				WBVar00370922	17859	17859
				WBVar00746460	23873	23873
				WBVar00370923	18000	18000
				WBVar00173652	8905	8905
				WBVar00173654	11614	11614
				WBVar00746461	23956	23956
				WBVar00370924	19540	19540
				WBVar00370925	20898	20898
				WBVar00746462	24083	24083
				WBVar00173655	12153	12153
				WBVar00262818	24632	24633
				WBVar00746463	24180	24180
				WBVar00370926	21086	21086
				WBVar00173656	12499	12499
				WBVar00303130	24224	24224
				WBVar00746464	24212	24212
				WBVar00173657	13366	13366
				WBVar00370927	21089	21089
				WBVar00370928	21349	21349
				WBVar00173658	13435	13435
				WBVar00746465	24355	24355
				WBVar00173659	14067	14067
				WBVar00598436	16739	16739
				WBVar00370929	21972	21972
				WBVar00746466	24614	24614
				WBVar00598437	16739	16739
				WBVar00370930	22087	22087
				WBVar00746467	24742	24742
				WBVar00173661	14484	14484
				WBVar00746468	24907	24907
				WBVar00598438	16739	16739
				WBVar00173662	17231	17231
				WBVar00370931	22192	22192
				WBVar00370932	24770	24770
				WBVar00598439	16739	16739
				WBVar00746469	25285	25285
				WBVar00173663	17729	17729
				WBVar00173664	19035	19035
				WBVar00598440	16739	16739
				WBVar00370933	25590	25590
				WBVar00746470	25392	25392
				WBVar00370934	26147	26147
				WBVar00746471	25478	25478
				WBVar00598441	16739	16739
				WBVar00173665	20261	20261
				WBVar00173666	21189	21189
				WBVar00746472	26090	26090
				WBVar00370935	26251	26251
				WBVar00598442	16739	16739
				WBVar00598443	16739	16739
				WBVar00370936	27289	27289
				WBVar00173667	22050	22050
				WBVar00746473	26249	26249
				WBVar00263934	20511	20512
				WBVar00370937	27693	27693
				WBVar00746474	26307	26307
				WBVar00173668	22195	22195
				WBVar00299594	2433	2433
				WBVar00598444	16739	16739
				WBVar01477673	10278	10279
				WBVar00173669	22823	22823
				WBVar00370938	28511	28511
				WBVar00746475	26307	26307
				WBVar00173670	23024	23024
				WBVar01477674	12376	12377
				WBVar00370939	29136	29136
				WBVar00746476	26378	26378
				WBVar00104584	5484	5484
				WBVar00104585	9463	9463
				WBVar00173671	24049	24049
				WBVar00746477	26380	26380
				WBVar00370940	29372	29372
				WBVar00370941	29735	29735
				WBVar00746478	26564	26564
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				WBsf717714	4457	4894
				WBsf717715	6428	7020
				WBsf261528	1718	1864
				WBsf261529	14059	14110
				WBsf261530	19458	19507
				WBsf265124	12332	12382
			Feature_data	T05A6:Polysome	1	30392
				T05A6:TranscriptionallyActiveRegion	1	30392
				T05A6:ChIPSeqTF	1	30392
				T05A6:TRF	1	30392
				T05A6:Dust	1	30392
				T05A6:inverted	1	30392
			Homol_data	T05A6:RNAi	1	30392
				T05A6:SAGE	1	30392
				T05A6:Mass-spec	1	30392
				T05A6:TEC_RED	1	30392
				T05A6:wublastx_brenneri	1	30392
				T05A6:wublastx_briggsae	1	30392
				T05A6:wublastx_brugia	1	30392
				T05A6:wublastx_japonica	1	30392
				T05A6:wublastx_ovolvulus	1	30392
				T05A6:wublastx_pristionchus	1	30392
				T05A6:wublastx_remanei	1	30392
				T05A6:wublastx_worm	1	30392
				T05A6:RepeatMasker	1	30392
	Structure	From	Source	CHROMOSOME_II
		Overlap_right	T09A5	30294
		Overlap_left	C06A8
		Clone_left_end	T05A6	1
			T09A5	30289
		Clone_right_end	C06A8	100
	DB_info	Database	EMBL	NDB_AC	Z50796
				NDB_SV	Z50796.3
		DB_remark	[121025] Sequence correction WBsf268502 : Deletion A-1 bases @ 2089
			[121025] Sequence correction WBsf268565 : Insertion C1 bases from @ 8406
			[121025] Sequence correction WBsf268003 : Insertion C1 bases from @ 24220
		Keyword	HTG
		EMBL_dump_info	EMBL_dump_method	worm_EMBL-dump
	Origin	From_author	Thomas K
		From_laboratory	HX
		Date_directory	010315
		Species	Caenorhabditis elegans
		Strain	WBStrain00000001
	Visible	Clone	T05A6
		Reference	WBPaper00014819
			WBPaper00014901
			WBPaper00022321
		Remark	980723:sjj:T05A6.2 and T05A6.3 were merged into T05A6.2 due to EST data
	Properties	Genomic_canonical
		Checksum	MD5	f9e3575aeb0d1b30d5f8ca25fc8a295b
		Status	Finished	19 May 1995 00:00:00
			Submitted	17 Aug 1995 00:00:00
			Annotated	15 Aug 1995 00:00:00
	Map	Sequence-II	Ends	Left	4631
				Right	4651
	Interpolated_map_position	II	0.572157
	Assembly_tags	Finished Left	4	1	T05A6
		Clone right end	100	97	C06A8
		annotation	21700	21713	variable number of Ts 11 or 12 (majority)
		Clone left end	30289	30292	T09A5
		Finished Right	30392	30389	T05A6
	Method	Genomic_canonical