WormBase Tree Display for Sequence: R08E5
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R08E5 | DNA | R08E5 | 8163 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child | WBGene00019962 | 7263 | 5663 | |
WBGene00019963 | 3148 | 5736 | ||||
WBGene00019961 | 2645 | 925 | ||||
CDS_child (105) | ||||||
Transcript | R08E5.1a.1 | 2623 | 928 | |||
R08E5.1b.1 | 2645 | 1027 | ||||
R08E5.1b.2 | 2636 | 925 | ||||
R08E5.1b.3 | 2618 | 1027 | ||||
R08E5.1b.4 | 2435 | 934 | ||||
R08E5.2.1 | 7263 | 5663 | ||||
R08E5.3.1 | 3148 | 5736 | ||||
PCR_product (12) | ||||||
Allele (264) | ||||||
Oligo_set | Aff_R08E5.1 | 2149 | 1430 | |||
Aff_R08E5.2 | 6743 | 5724 | ||||
Aff_R08E5.3 | 4915 | 5561 | ||||
Aff_R08E5.4 | 564 | 903 | ||||
Feature_object (109) | ||||||
Feature_data | R08E5:Polysome | 1 | 8163 | |||
R08E5:TranscriptionallyActiveRegion | 1 | 8163 | ||||
R08E5:ChIPSeqTF | 1 | 8163 | ||||
R08E5:TRF | 1 | 8163 | ||||
R08E5:Dust | 1 | 8163 | ||||
R08E5:inverted | 1 | 8163 | ||||
Homol_data (18) | ||||||
Structure | From | Source | CHROMOSOME_V | |||
Overlap_right | R08F11 | 7964 | ||||
Overlap_left | Y39H10A | |||||
Clone_left_end | R08F11 | 1 | ||||
R08E5 | 1 | |||||
DB_info | Database | EMBL | NDB_AC | FO081677 | ||
NDB_ID | _U97004 | |||||
NDB_SV | FO081677.1 | |||||
Secondary_accession | U97004 | |||||
DB_remark | The 5' clone is Y39H10A, 200 bp overlap; the 3' clone is R08F11, 200 bp overlap. Actual start of this clone is at base position 1 of R08E5; actual end is at 32838 of R08F11. | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Minx P | ||||
From_laboratory | RW | |||||
Date | 21 May 1998 00:00:00 | |||||
14 Jun 1996 00:00:00 | ||||||
Date_directory | 960613 | |||||
Species | Caenorhabditis elegans | |||||
Visible | Clone | R08E5 | ||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | b2c41f15be43f04598401e43645033a0 | ||||
Status | Shotgun | |||||
Finished | ||||||
Submitted | 21 May 1998 00:00:00 | |||||
Map | Sequence-V | |||||
Interpolated_map_position | V | -8.00007 | ||||
Method | Genomic_canonical |