WormBase Tree Display for Gene: WBGene00019962
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| WBGene00019962 | SMap | S_parent | Sequence | R08E5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cysl-3 | Paper_evidence | WBPaper00039977 | |||||
| Person_evidence | WBPerson537 | ||||||||
| Sequence_name | R08E5.2 | ||||||||
| Molecular_name | R08E5.2 | ||||||||
| R08E5.2.1 | |||||||||
| CE12574 | |||||||||
| Other_name | CELE_R08E5.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | cysl-3 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 29 Sep 2011 10:45:56 | WBPerson2970 | Name_change | CGC_name | cysl-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cysl | ||||||||
| Allele (56) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (38) | |||||||||
| Paralog (12) | |||||||||
| Structured_description | Automated_description | Enables cysteine synthase activity. Involved in cysteine biosynthetic process from serine. Predicted to be located in cytoplasm. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R08E5.2 | |||||||
| Corresponding_CDS_history | R08E5.2b:wp253 | ||||||||
| R08E5.2c:wp253 | |||||||||
| Corresponding_transcript | R08E5.2.1 | ||||||||
| Other_sequence | CBC03426_1 | ||||||||
| CRC00768_1 | |||||||||
| CBC12335_1 | |||||||||
| BXC05620_1 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051553 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017593 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024098 | ||||||||
| Expr1038672 | |||||||||
| Expr1155231 | |||||||||
| Expr2010750 | |||||||||
| Expr2028986 | |||||||||
| Drives_construct | WBCnstr00025464 | ||||||||
| Construct_product | WBCnstr00025464 | ||||||||
| Microarray_results (35) | |||||||||
| Expression_cluster (160) | |||||||||
| Interaction (44) | |||||||||
| Map_info | Map | V | Position | -7.99892 | Error | 0.002322 | |||
| Positive | Positive_clone | R08E5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026952 | ||||||||
| WBPaper00032014 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040475 | |||||||||
| WBPaper00044277 | |||||||||
| WBPaper00045409 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
