WormBase Tree Display for Sequence: R01H2
expand all nodes | collapse all nodes | view schema
R01H2 | DNA | R01H2 | 33841 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child | WBGene00019810 | 20931 | 22916 | |
WBGene00019812 | 28675 | 25413 | ||||
WBGene00019809 | 27270 | 27584 | ||||
WBGene00006713 | 32960 | 32076 | ||||
WBGene00019813 | 31867 | 29829 | ||||
WBGene00019811 | 24973 | 22917 | ||||
CDS_child (172) | ||||||
Transcript | R01H2.1.1 | 27270 | 27584 | |||
R01H2.2.1 | 20931 | 22916 | ||||
R01H2.3.1 | 24973 | 22917 | ||||
R01H2.4a.1 | 28675 | 25413 | ||||
R01H2.4b.1 | 27545 | 25501 | ||||
R01H2.5.1 | 31867 | 29829 | ||||
R01H2.6.1 | 32960 | 32076 | ||||
PCR_product (30) | ||||||
Allele (477) | ||||||
Oligo_set | Aff_R01H2.1 | 27268 | 27582 | |||
Aff_R01H2.2 | 21917 | 22884 | ||||
Aff_R01H2.3 | 23779 | 23030 | ||||
Aff_R01H2.4 | 26344 | 25499 | ||||
Aff_R01H2.5 | 30769 | 29951 | ||||
Aff_R01H2.6 | 33077 | 32255 | ||||
Aff_ZK418.3 | 33731 | 35273 | ||||
Feature_object (159) | ||||||
Feature_data | R01H2:Polysome | 1 | 33841 | |||
R01H2:TranscriptionallyActiveRegion | 1 | 33841 | ||||
R01H2:ChIPSeqTF | 1 | 33841 | ||||
R01H2:TRF | 1 | 33841 | ||||
R01H2:Dust | 1 | 33841 | ||||
R01H2:inverted | 1 | 33841 | ||||
Homol_data (20) | ||||||
Structure | From | Source | CHROMOSOME_III | |||
Overlap_right | ZK418 | 33642 | ||||
Overlap_left | F11H8 | |||||
Clone_left_end | R01H2 | 1 | ||||
Clone_right_end | F11H8 | 11502 | ||||
DB_info | Database | EMBL | NDB_AC | FO081121 | ||
NDB_ID | _U00035 | |||||
NDB_SV | FO081121.2 | |||||
Secondary_accession | U00035 | |||||
DB_remark | The 5' clone is F11H8, 200 bp overlap; the 3' clone is ZK418, 200 bp overlap. Actual start of this clone is at base position 1 of R01H2; actual end is at 5503 of ZK418. | |||||
[121025] Sequence correction WBsf268141 : Insertion C1 bases from @ 2109 | ||||||
[121025] Sequence correction WBsf268256 : Insertion C1 bases from @ 11741 | ||||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Miller N | ||||
Babbs N | ||||||
From_laboratory | RW | |||||
Date | 12 Dec 1993 00:00:00 | |||||
25 Jan 1994 00:00:00 | ||||||
Species | Caenorhabditis elegans | |||||
Visible | Clone | R01H2 | ||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | f170a15ea25627258fa8a641af8e70bd | ||||
Status | Finished | |||||
Submitted | 12 Dec 1993 00:00:00 | |||||
Map | Sequence-III | |||||
Interpolated_map_position | III | -0.809768 | ||||
Method | Genomic_canonical |