WormBase Tree Display for Sequence: C01F1
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| C01F1 | DNA | C01F1 | 39189 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00015300 | 15666 | 13245 | |
| WBGene00202373 | 29417 | 29163 | ||||
| WBGene00015296 | 35428 | 39091 | ||||
| WBGene00015297 | 33474 | 34666 | ||||
| WBGene00015298 | 28922 | 32771 | ||||
| WBGene00195643 | 29286 | 29411 | ||||
| WBGene00015299 | 10023 | 13089 | ||||
| WBGene00015301 | 22032 | 16003 | ||||
| CDS_child (159) | ||||||
| Transcript | C01F1.7 | 29286 | 29411 | |||
| C01F1.8 | 29417 | 29163 | ||||
| C01F1.1.1 | 35428 | 39091 | ||||
| C01F1.2.1 | 33474 | 34666 | ||||
| C01F1.3a.1 | 28922 | 32771 | ||||
| C01F1.3b.1 | 32193 | 32705 | ||||
| C01F1.4.1 | 10023 | 13089 | ||||
| C01F1.5.1 | 15666 | 13245 | ||||
| C01F1.6.1 | 22032 | 16003 | ||||
| PCR_product (20) | ||||||
| Allele (879) | ||||||
| Oligo_set | Aff_C01F1.1 | 37527 | 38975 | |||
| Aff_C01F1.2 | 33876 | 34537 | ||||
| Aff_C01F1.3 | 31238 | 32703 | ||||
| Aff_C01F1.4 | 11393 | 12946 | ||||
| Aff_C01F1.5 | 14594 | 13609 | ||||
| Aff_C01F1.6 | 18773 | 16410 | ||||
| Feature_object (270) | ||||||
| Feature_data | C01F1:Polysome | 1 | 39189 | |||
| C01F1:TranscriptionallyActiveRegion | 1 | 39189 | ||||
| C01F1:ChIPSeqTF | 1 | 39189 | ||||
| C01F1:TRF | 1 | 39189 | ||||
| C01F1:Dust | 1 | 39189 | ||||
| C01F1:inverted | 1 | 39189 | ||||
| Homol_data (21) | ||||||
| Structure | From | Source | CHROMOSOME_II | |||
| Overlap_right | Y52E8A | 38990 | ||||
| Overlap_left | C16A11 | |||||
| Clone_left_end | C01F1 | 1 | ||||
| Clone_right_end | C16A11 | 1945 | ||||
| C01F1 | 39189 | |||||
| DB_info | Database | EMBL | NDB_AC | FO080258 | ||
| NDB_ID | _U58761 | |||||
| NDB_SV | FO080258.2 | |||||
| Secondary_accession | U58761 | |||||
| DB_remark | The 5' clone is C16A11, 200 bp overlap; the 3' clone is Y52E8A, 200 bp overlap. Actual start of this clone is at base position 1 of C01F1; actual end is at 39187 of C01F1. | |||||
| [121025] Sequence correction WBsf268265 : Insertion C1 bases from @ 7134 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Johnson D | ||||
| From_laboratory | RW | |||||
| Date | 09 Feb 1996 00:00:00 | |||||
| Date_directory | 960202 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | C01F1 | ||||
| Remark | added a C at base position 17814. [tb 20050926] | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 476f5d68d21fc0a973f56c9df5530ea0 | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 09 Feb 1996 00:00:00 | |||||
| Map | Sequence-II | |||||
| Interpolated_map_position | II | -4.94853 | ||||
| Method | Genomic_canonical |
