WormBase Tree Display for Gene: WBGene00015298
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| WBGene00015298 | SMap | S_parent | Sequence | C01F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | rml-4 | |||||||
| Sequence_name | C01F1.3 | ||||||||
| Molecular_name | C01F1.3a | ||||||||
| C01F1.3a.1 | |||||||||
| CE06744 | |||||||||
| C01F1.3b | |||||||||
| CE39553 | |||||||||
| C01F1.3b.1 | |||||||||
| Other_name | phi-41 | Person_evidence | WBPerson2582 | ||||||
| CELE_C01F1.3 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | rml-4 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Mar 2005 13:54:35 | WBPerson2970 | Name_change | Other_name | phi-41 | ||||
| 3 | 30 Jul 2020 16:55:49 | WBPerson1983 | Name_change | CGC_name | rml-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rml | ||||||||
| Allele (70) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00058492 | ||||||||
| Ortholog (33) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Automated_description | Predicted to enable dTDP-glucose 4,6-dehydratase activity. Predicted to be involved in small molecule metabolic process. Expressed in hyp7 syncytium; hypodermal cell; and seam cell. Human ortholog(s) of this gene implicated in Catel Manzke syndrome. Is an ortholog of human TGDS (TDP-glucose 4,6-dehydratase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081122 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20324) | ||||
| Molecular_info | Corresponding_CDS | C01F1.3a | |||||||
| C01F1.3b | |||||||||
| Corresponding_CDS_history | C01F1.3:wp153 | ||||||||
| Corresponding_transcript | C01F1.3a.1 | ||||||||
| C01F1.3b.1 | |||||||||
| Other_sequence (66) | |||||||||
| Associated_feature | WBsf657457 | ||||||||
| WBsf987566 | |||||||||
| WBsf987567 | |||||||||
| WBsf987568 | |||||||||
| WBsf1012069 | |||||||||
| WBsf1012070 | |||||||||
| WBsf221100 | |||||||||
| WBsf221101 | |||||||||
| WBsf221102 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00072893 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00072891 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028279 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024431 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00064445 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072892 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00065015 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039300 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr15741 | ||||||||
| Expr15743 | |||||||||
| Expr15745 | |||||||||
| Expr1023724 | |||||||||
| Expr1036552 | |||||||||
| Expr1143418 | |||||||||
| Expr2000281 | |||||||||
| Expr2018503 | |||||||||
| Drives_construct | WBCnstr00042502 | ||||||||
| WBCnstr00042505 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (224) | |||||||||
| Interaction (75) | |||||||||
| Map_info | Map | II | Position | -4.93635 | |||||
| Positive | Positive_clone | C01F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065106 | |||||||||
| WBPaper00066191 | |||||||||
| Remark | [2020-07-30T16:55:49.549Z WBPerson1983] Gene Updated: Releasing from confidential | Curator_confirmed | WBPerson1983 | ||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
