WormBase Tree Display for Sequence: D2089

D2089 DNA: D2089 34733
  SMap: S_child: Gene_child: WBGene00001522 34099 30748
        WBGene00008433 1288 521
        WBGene00004207 15898 30578
        WBGene00271706 3077 2541
        WBGene00200494 27080 26868
        WBGene00008434 5427 3829
        WBGene00197694 15794 15645
      CDS_child (211)
      Transcript: D2089.6 15794 15645
        D2089.7 27080 26868
        D2089.2.1 1288 521
        D2089.3.1 5427 3829
        D2089.4a.1 15898 30578
        D2089.4b.1 26651 30086
        D2089.5.1 34099 30748
        D2089.8.1 3077 2541
      Nongenomic: yk394e4 30810 34101
      PCR_product (17)
      Allele: WBVar00764124 16104 16104
        WBVar00764125 16646 16646
        WBVar00764126 16838 16838
        WBVar01546830 704 704
        WBVar00764127 17107 17107
        WBVar00228562 1184 1184
        WBVar00228563 6614 6614
        WBVar01546831 2622 2622
        WBVar00764128 17238 17238
        WBVar01546832 2623 2623
        WBVar00228564 6964 6964
        WBVar00764129 17329 17329
        WBVar00228565 7532 7532
        WBVar01546833 2904 2904
        WBVar00764130 17500 17500
        WBVar00764131 17624 17624
        WBVar00228566 9472 9472
        WBVar01546834 6139 6139
        WBVar01546835 11048 11048
        WBVar00764132 17663 17663
        WBVar01891758 24501 24501
        WBVar00764133 17679 17679
        WBVar01546836 12364 12364
        WBVar01546837 15195 15195
        WBVar00764134 18278 18278
        WBVar00228571 23859 23859
        WBVar00764135 18913 18913
        WBVar01546838 16131 16131
        WBVar01546839 18083 18083
        WBVar00228572 25936 25936
        WBVar00764136 18986 18986
        WBVar01943499 1579 1580
        WBVar00764137 19202 19202
        WBVar00228573 26577 26577
        WBVar01546840 24443 24443
        WBVar00764138 19220 19220
        WBVar00228574 29483 29483
        WBVar01546841 29913 29913
        WBVar02045568 24487 24487
        WBVar01943500 17008 17008
        WBVar01943501 30200 30201
        WBVar00764139 19640 19640
        WBVar00228575 30741 30741
        WBVar01935484 16954 16955
        WBVar00228576 31773 31773
        WBVar01935486 28529 28531
        WBVar00764140 19894 19894
        WBVar00764141 19947 19947
        WBVar01935487 28662 28662
        WBVar00228577 31776 31776
        WBVar00228578 32512 32512
        WBVar00764142 20049 20049
        WBVar01935488 30153 30154
        WBVar00764143 20079 20079
        WBVar00764144 20147 20147
        WBVar00764145 20351 20351
        WBVar00764146 20399 20399
        WBVar02068200 9157 9165
        WBVar00764147 20495 20495
        WBVar00764148 20576 20576
        WBVar00764149 20636 20636
        WBVar01495124 9079 9079
        WBVar00764150 20694 20694
        WBVar01784467 14790 14790
        WBVar00764151 20694 20694
        WBVar01784468 34313 34313
        WBVar00764152 21077 21077
        WBVar01784469 34463 34463
        WBVar00764153 21120 21120
        WBVar00764154 21179 21179
        WBVar02075855 10888 11107
        WBVar00764155 21240 21240
        WBVar00764156 21323 21323
        WBVar00764157 21673 21673
        WBVar00764158 21702 21702
        WBVar02072302 19552 19552
        WBVar00764159 21717 21717
        WBVar00764160 21807 21807
        WBVar00376625 92 92
        WBVar00764161 22063 22063
        WBVar00376626 122 122
        WBVar01439592 940 940
        WBVar00764162 22075 22075
        WBVar01439593 954 954
        WBVar00376627 394 394
        WBVar00764163 22106 22106
        WBVar00764164 22109 22109
        WBVar00376628 428 428
        WBVar01439594 1345 1345
        WBVar01439595 1390 1390
        WBVar00764165 22156 22156
        WBVar00376629 1487 1487
        WBVar00764166 22195 22195
        WBVar00376630 1853 1853
        WBVar01439596 1420 1420
        WBVar00093264 735 2163
        WBVar01439597 1468 1468
        WBVar00764167 22211 22211
        WBVar00376631 1873 1873
        WBVar00376632 2420 2420
        WBVar00764168 22292 22292
        WBVar01439598 1773 1773
        WBVar01439599 1788 1788
        WBVar00764169 22314 22314
        WBVar00376633 2774 2774
        WBVar00764170 22343 22343
        WBVar00376634 2820 2820
        WBVar01439600 7161 7161
        WBVar00376635 2976 2976
        WBVar00764171 22477 22477
        WBVar01439603 8923 8923
        WBVar00764172 22833 22833
        WBVar01439604 8943 8943
        WBVar00376636 3089 3089
        WBVar00764173 22883 22883
        WBVar00376637 3117 3117
        WBVar01439605 8963 8963
        WBVar01439606 8976 8976
        WBVar00376638 3620 3620
        WBVar00764174 22898 22898
        WBVar00376639 4242 4242
        WBVar01439607 9098 9098
        WBVar00764175 22962 22962
        WBVar00376640 4645 4645
        WBVar01792268 10605 10605
        WBVar01439608 9103 9103
        WBVar00764176 23113 23113
        WBVar00764177 23287 23287
        WBVar01439609 9104 9104
        WBVar00376641 5142 5142
        WBVar00376642 5781 5781
        WBVar00764178 23438 23438
        WBVar01439610 9105 9105
        WBVar00764179 23506 23506
        WBVar01439611 9106 9106
        WBVar00376643 5798 5798
        WBVar01604822 7915 7915
        WBVar00376644 6316 6316
        WBVar01439612 11783 11783
        WBVar01604823 9165 9165
        WBVar00764180 23577 23577
        WBVar01439613 11813 11813
        WBVar00764181 23615 23615
        WBVar01604824 9173 9173
        WBVar00376645 6517 6517
        WBVar01439614 11817 11817
        WBVar01604825 9347 9347
        WBVar00376646 6889 6889
        WBVar00764182 23821 23821
        WBVar00764183 23830 23830
        WBVar01604826 12234 12234
        WBVar01439615 11847 11847
        WBVar00376647 7668 7668
        WBVar01604827 12420 12420
        WBVar00376648 8055 8055
        WBVar00764184 23865 23865
        WBVar01439616 11888 11888
        WBVar00764185 23987 23987
        WBVar01439617 11903 11903
        WBVar01604828 13159 13159
        WBVar00175319 8196 8196
        WBVar00376649 8792 8792
        WBVar00764186 24006 24006
        WBVar00376650 8905 8905
        WBVar00175320 8413 8413
        WBVar01439618 11930 11930
        WBVar01604829 13383 13383
        WBVar00175321 9398 9398
        WBVar00376651 8992 8992
        WBVar00764187 24006 24006
        WBVar01439619 16787 16787
        WBVar01604830 13385 13385
        WBVar00764188 24057 24057
        WBVar01604831 14987 14987
        WBVar00175322 13185 13185
        WBVar01439620 18655 18655
        WBVar00376652 9050 9050
        WBVar00268973 22488 22489
        WBVar00175323 13735 13735
        WBVar01439621 22902 22902
        WBVar01604832 15005 15005
        WBVar00376653 9118 9118
        WBVar00268974 26461 26462
        WBVar00764189 24117 24117
        WBVar00268975 26465 26466
        WBVar00175324 14435 14435
        WBVar00764190 24192 24192
        WBVar01604833 15274 15274
        WBVar00376654 9163 9163
        WBVar01604834 16238 16238
        WBVar00376655 9401 9401
        WBVar00175326 20843 20843
        WBVar00764191 24196 24196
        WBVar00175327 23100 23100
        WBVar00764192 24232 24232
        WBVar00376656 10136 10136
        WBVar01604835 17240 17240
        WBVar00376657 10222 10222
        WBVar01604836 18525 18525
        WBVar00764193 24420 24420
        WBVar00175328 32670 32670
        WBVar00175329 33743 33743
        WBVar00764194 24486 24486
        WBVar00376658 10586 10586
        WBVar01604837 18936 18936
        WBVar00376659 10619 10619
        WBVar01960240 18453 18460
        WBVar01604838 19044 19044
        WBVar00764195 24577 24577
        WBVar00175330 34011 34011
        WBVar01604839 19380 19380
        WBVar00376660 11137 11137
        WBVar00764196 24699 24699
        WBVar00598464 3620 3620
        WBVar01604840 19381 19381
        WBVar00764197 24707 24707
        WBVar00376661 11141 11141
        WBVar00764198 25029 25029
        WBVar00376662 11209 11209
        WBVar00598465 3620 3620
        WBVar01604841 19502 19502
        WBVar00598466 3620 3620
        WBVar01604842 19567 19567
        WBVar00764199 25192 25192
        WBVar00376663 12361 12361
        WBVar00145520 28439 28980
        WBVar00764016 96 96
        WBVar01604843 20620 20620
        WBVar00376664 12810 12810
        WBVar00764200 25817 25817
        WBVar00598467 3620 3620
        WBVar00598468 3620 3620
        WBVar00376665 13781 13781
        WBVar01604844 20854 20854
        WBVar00764017 464 464
        WBVar00764201 25922 25922
        WBVar00598469 3620 3620
        WBVar00376666 13815 13815
        WBVar01604845 22703 22703
        WBVar00764018 616 616
        WBVar00264143 25074 25075
        WBVar00764202 26141 26141
        WBVar00764203 26267 26267
        WBVar00598470 3620 3620
        WBVar00376667 14374 14374
        WBVar01604846 22714 22714
        WBVar00764019 787 787
        WBVar00764204 26594 26594
        WBVar01604847 23260 23260
        WBVar00598471 3620 3620
        WBVar00764020 1136 1136
        WBVar00376668 14643 14643
        WBVar00376669 15802 15802
        WBVar00276207 8999 8999
        WBVar00598472 3620 3620
        WBVar00764021 1536 1536
        WBVar00764205 26619 26619
        WBVar01604848 24412 24412
        WBVar00552671 14709 14709
        WBVar00276208 16256 16256
        WBVar00764206 26640 26640
        WBVar01604849 24589 24589
        WBVar00376670 15846 15846
        WBVar00598473 3620 3620
        WBVar00764022 1594 1594
        WBVar00764023 1823 1823
        WBVar00376671 16705 16705
        WBVar01604850 24877 24877
        WBVar00598474 3620 3620
        WBVar00276209 31139 31139
        WBVar00764207 26642 26642
        WBVar01604851 26315 26315
        WBVar00764024 1844 1844
        WBVar00764208 26674 26674
        WBVar00376672 16730 16730
        WBVar00598475 3620 3620
        WBVar01604852 27396 27396
        WBVar00764025 1978 1978
        WBVar00376673 17042 17042
        WBVar00764209 26677 26677
        WBVar00598476 3620 3620
        WBVar01254063 12603 12605
        WBVar00598477 3620 3620
        WBVar00376674 17477 17477
        WBVar00764026 2113 2113
        WBVar00764210 26715 26715
        WBVar01604853 27446 27446
        WBVar00764211 26832 26832
        WBVar01604854 27906 27906
        WBVar00764027 2307 2307
        WBVar00598478 3620 3620
        WBVar00376675 18512 18512
        WBVar00598479 3620 3620
        WBVar01604855 28363 28363
        WBVar00376676 18705 18705
        WBVar00764212 26995 26995
        WBVar00764028 2427 2427
        WBVar00764213 27691 27691
        WBVar00598480 3620 3620
        WBVar00764029 2508 2508
        WBVar01604856 29384 29384
        WBVar00376677 19076 19076
        WBVar01604857 30130 30130
        WBVar00376678 19601 19601
        WBVar00764214 27699 27699
        WBVar00764030 2831 2831
        WBVar00764031 2869 2869
        WBVar00764215 27717 27717
        WBVar00376679 19898 19898
        WBVar01604858 30454 30454
        WBVar00376680 20338 20338
        WBVar01902619 14113 14113
        WBVar00764032 3156 3156
        WBVar01604859 30791 30791
        WBVar00764216 28206 28206
        WBVar00764217 28892 28892
        WBVar01604860 30931 30931
        WBVar00764033 3356 3356
        WBVar00376681 20580 20580
        WBVar00764218 28901 28901
        WBVar00376682 21166 21166
        WBVar01604861 33290 33290
        WBVar00764034 3429 3429
        WBVar00764035 3602 3602
        WBVar01604862 34304 34304
        WBVar00764219 29107 29107
        WBVar00376683 21247 21247
        WBVar00376684 21354 21354
        WBVar00764220 29352 29352
        WBVar00764036 3674 3674
        WBVar00764221 29478 29478
        WBVar00764037 3876 3876
        WBVar00376685 22041 22041
        WBVar00764222 29976 29976
        WBVar00764038 4004 4004
        WBVar00376686 22220 22220
        WBVar00376687 22365 22365
        WBVar00764223 29985 29985
        WBVar00764039 4268 4268
        WBVar00764224 30057 30057
        WBVar00764040 4360 4360
        WBVar00376688 22374 22374
        WBVar02097695 24483 24487
        WBVar00376689 22510 22510
        WBVar00764041 4381 4381
        WBVar00764225 30057 30057
        WBVar00764042 4408 4408
        WBVar00376690 22763 22763
        WBVar00764226 30265 30265
        WBVar00376691 22855 22855
        WBVar00764227 30287 30287
        WBVar00764043 4418 4418
        WBVar00764228 30287 30287
        WBVar01895224 4051 4051
        WBVar00764044 4775 4775
        WBVar00376692 22864 22864
        WBVar00376693 22962 22962
        WBVar00764229 30306 30306
        WBVar01895225 12242 12242
        WBVar00764045 4914 4914
        WBVar02089236 17207 17210
        WBVar00764230 30336 30336
        WBVar00764046 4974 4974
        WBVar01895226 14781 14781
        WBVar00376694 22998 22998
        WBVar02130659 2802 2802
        WBVar00764047 5079 5079
        WBVar00764231 30550 30550
        WBVar00376695 23242 23242
        WBVar01895227 20978 20978
        WBVar00764048 5091 5091
        WBVar02130660 18897 18897
        WBVar00764232 30590 30590
        WBVar01895228 26932 26932
        WBVar00376696 23256 23256
        WBVar02130661 19828 19828
        WBVar00376697 24223 24223
        WBVar00764049 5137 5137
        WBVar00764233 30711 30711
        WBVar01895229 33209 33209
        WBVar00376698 24392 24392
        WBVar00764050 5264 5264
        WBVar01895230 34116 34116
        WBVar00764234 30711 30711
        WBVar02130662 21290 21290
        WBVar00764235 30759 30759
        WBVar02130663 26895 26895
        WBVar00764051 5476 5476
        WBVar00376699 24570 24570
        WBVar00764052 5499 5499
        WBVar00764236 31054 31054
        WBVar00376700 24918 24918
        WBVar00764237 31068 31068
        WBVar00376701 24929 24929
        WBVar00764053 5521 5521
        WBVar00764054 5558 5558
        WBVar00764238 31176 31176
        WBVar00376702 25008 25008
        WBVar00764239 31250 31250
        WBVar00376703 25181 25181
        WBVar00764055 5668 5668
        WBVar00764056 5914 5914
        WBVar00376704 25799 25799
        WBVar00764240 31327 31327
        WBVar00376705 26394 26394
        WBVar01477920 1999 2010
        WBVar00764241 31497 31497
        WBVar00764057 6104 6104
        WBVar00764058 6193 6193
        WBVar00376706 27127 27127
        WBVar01477921 1999 2010
        WBVar00764242 31657 31657
        WBVar01477922 1999 2010
        WBVar00764059 6240 6240
        WBVar00376707 27615 27615
        WBVar00764243 31798 31798
        WBVar00376708 28580 28580
        WBVar01477923 13048 13049
        WBVar00764060 6252 6252
        WBVar00764244 32307 32307
        WBVar00764061 6288 6288
        WBVar00764245 32360 32360
        WBVar01477924 13048 13049
        WBVar00376709 28683 28683
        WBVar01477925 13048 13049
        WBVar00376710 29318 29318
        WBVar00764246 32726 32726
        WBVar00764062 6420 6420
        WBVar00764247 32748 32748
        WBVar00764063 6423 6423
        WBVar01477926 13048 13049
        WBVar00376711 29557 29557
        WBVar00376712 30893 30893
        WBVar00764248 32856 32856
        WBVar01477927 13048 13049
        WBVar00764064 6436 6436
        WBVar00764065 6614 6614
        WBVar00764249 33035 33035
        WBVar00376713 31208 31208
        WBVar00764066 6742 6742
        WBVar00376714 31304 31304
        WBVar00764250 33093 33093
        WBVar00764251 33150 33150
        WBVar00376715 31559 31559
        WBVar00764067 6935 6935
        WBVar00764068 7024 7024
        WBVar00376716 31857 31857
        WBVar00764252 33154 33154
        WBVar00376717 32415 32415
        WBVar01375994 2811 2811
        WBVar00764253 33289 33289
        WBVar00764069 7110 7110
        WBVar00764254 33431 33431
        WBVar00764070 7411 7411
        WBVar00376718 32557 32557
        WBVar00764255 33638 33638
        WBVar00764071 7516 7516
        WBVar00376719 32646 32646
        WBVar00376720 32917 32917
        WBVar00764256 33641 33641
        WBVar00764072 7888 7888
        WBVar01982741 8503 8504
        WBVar00764073 8081 8081
        WBVar00376721 32934 32934
        WBVar01982742 8674 8675
        WBVar00764257 33829 33829
        WBVar00234811 6735 6735
        WBVar00376722 33909 33909
        WBVar02018142 20513 20514
        WBVar01982743 9920 9920
        WBVar00764258 33898 33898
        WBVar00764074 8102 8102
        WBVar00105514 2884 2884
        WBVar00234812 8504 8504
        WBVar00764075 8111 8111
        WBVar00376723 34275 34275
        WBVar01982744 10018 10019
        WBVar00764259 33979 33979
        WBVar00764260 34096 34096
        WBVar00105515 2885 2885
        WBVar01982745 11976 11976
        WBVar00234813 34037 34037
        WBVar00764076 8262 8262
        WBVar01982746 13049 13049
        WBVar00764077 8701 8701
        WBVar00105516 6114 6114
        WBVar00764261 34096 34096
        WBVar00764262 34286 34286
        WBVar01538598 28264 28264
        WBVar01982747 13160 13161
        WBVar00764078 8787 8787
        WBVar00105517 18830 18830
        WBVar00105518 19554 19554
        WBVar01982748 14985 14986
        WBVar00764079 9055 9055
        WBVar00105519 20952 20952
        WBVar01982749 18279 18279
        WBVar00764080 9259 9259
        WBVar00764081 9390 9390
        WBVar01982750 19470 19471
        WBVar01982751 23233 23235
        WBVar00105521 28009 28009
        WBVar00764082 9477 9477
        WBVar00105522 33574 33574
        WBVar00764083 9889 9889
        WBVar01982752 24477 24477
        WBVar01982753 24873 24875
        WBVar02156447 3305 5713
        WBVar00764084 10222 10222
        WBVar00764085 10421 10421
        WBVar01982754 25591 25591
        WBVar01982755 26140 26141
        WBVar00764086 10650 10650
        WBVar00764087 11049 11049
        WBVar01982756 30154 30154
        WBVar01982757 30345 30345
        WBVar00764088 11136 11136
        WBVar00243949 32895 32895
        WBVar01982758 31476 31477
        WBVar00764089 11164 11164
        WBVar00764090 11327 11327
        WBVar01378734 6734 6735
        WBVar00764091 11333 11333
        WBVar00764092 11439 11439
        WBVar01378745 8503 8504
        WBVar00764093 11600 11600
        WBVar01378756 12168 12169
        WBVar00764094 11601 11601
        WBVar01378767 17199 17200
        WBVar01378778 23331 23332
        WBVar00764095 11667 11667
        WBVar00764096 11698 11698
        WBVar01378789 30344 30345
        WBVar00764097 11888 11888
        WBVar00764098 11889 11889
        WBVar00764099 12135 12135
        WBVar00064466 15186 15187
        WBVar00764100 12287 12287
        WBVar00764101 12574 12574
        WBVar00764102 12586 12586
        WBVar00764103 12586 12586
        WBVar01394083 11518 11519
        WBVar00764104 12939 12939
        WBVar00764105 13449 13449
        WBVar00764106 13532 13532
        WBVar00764107 13704 13704
        WBVar00764108 13802 13802
        WBVar00764109 13897 13897
        WBVar01244150 8422 8422
        WBVar00764110 14225 14225
        WBVar01244151 11640 11640
        WBVar00764111 14225 14225
        WBVar01244153 13205 13205
        WBVar00764112 14228 14228
        WBVar01244154 16933 16933
        WBVar00764113 14386 14386
        WBVar00764114 14606 14606
        WBVar01244156 22929 22929
        WBVar00764115 14675 14675
        WBVar01244158 25010 25010
        WBVar01244161 26795 26795
        WBVar00764116 14790 14790
        WBVar00764117 14911 14911
        WBVar01244165 31977 31977
        WBVar00764118 15297 15297
        WBVar00764119 15430 15430
        WBVar00764120 15652 15652
        WBVar01405601 34036 34037
        WBVar00764121 15948 15948
        WBVar01493993 7327 7327
        WBVar00764122 15992 15992
        WBVar01666594 8289 8289
        WBVar00764123 16084 16084
        WBVar01666595 22694 22694
        WBVar00255965 10553 10554
      Oligo_set: Aff_D2089.1 1819 2418
        Aff_D2089.2 1255 670
        Aff_D2089.3 4391 2604
        Aff_D2089.4 28292 30086
        Aff_D2089.5 31757 30822
      Feature_object (227)
      Feature_data: D2089:Polysome 1 34733
        D2089:TranscriptionallyActiveRegion 1 34733
        D2089:ChIPSeqTF 1 34733
        D2089:TRF 1 34733
        D2089:Dust 1 34733
        D2089:inverted 1 34733
      Homol_data (17)
  Structure: From: Source: CHROMOSOME_II
    Overlap_right: C09G5 34633
    Overlap_left: M28
    Clone_left_end: D2089 1
      C09G5 34633
  DB_info: Database: EMBL NDB_AC Z36948
        NDB_SV Z36948.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Swinburne J
    From_laboratory: HX
    Date_directory: 940629
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: D2089
  Properties: Genomic_canonical
    Checksum: MD5: 48391e48825d0206d66db3428f343a26
    Status: Finished: 29 Jun 1994 00:00:00
      Submitted: 06 Sep 1994 00:00:00
      Annotated: 25 Aug 1994 00:00:00
  Map: Sequence-II Ends: Left: 6315
        Right: 6349
  Interpolated_map_position: II 3.12329
  Assembly_tags: cosmid vector 1 16 Beginning of D2089
      34633 34649 Beginning of C09G5
    annotation 1 16
      19197 19208 This clone is missing TG with respect to the others in this well covered region. I couldn't do a terminator reaction on the clone as the second prep wasn't the same (!)
      34633 34649
  Method: Genomic_canonical