WormBase Tree Display for Gene: WBGene00001522
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| WBGene00001522 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | D2089 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | gbh-1 | Person_evidence | WBPerson52 | |||||
| Sequence_name | D2089.5 | ||||||||
| Molecular_name | D2089.5 | ||||||||
| D2089.5.1 | |||||||||
| CE00940 | |||||||||
| Other_name | CELE_D2089.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | gbh-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gbh | ||||||||
| Allele (59) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00001523 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | gbh-1 encodes a predicted ortholog of human hBBOX1; expressed in the intestine and in head and body muscles. | Paper_evidence | WBPaper00018600 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable gamma-butyrobetaine dioxygenase activity and iron ion binding activity. Predicted to be involved in carnitine biosynthetic process. Predicted to be located in mitochondrion. Is an ortholog of human BBOX1 (gamma-butyrobetaine hydroxylase 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D2089.5 | |||||||
| Corresponding_transcript | D2089.5.1 | ||||||||
| Other_sequence (26) | |||||||||
| Associated_feature | WBsf650516 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00002369 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043512 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030424 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026771 | ||||||||
| Expr1030916 | |||||||||
| Expr1147506 | |||||||||
| Expr2011958 | |||||||||
| Expr2030195 | |||||||||
| Drives_construct | WBCnstr00036890 | ||||||||
| Construct_product | WBCnstr00036890 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (133) | |||||||||
| Interaction (62) | |||||||||
| Map_info | Map | II | Position | 3.12352 | Error | 8.2e-05 | |||
| Positive | Positive_clone | D2089 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00011400 | ||||||||
| WBPaper00011648 | |||||||||
| WBPaper00018600 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Sequence connection from [Apicella AJ, Bazzicalupo P] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
