WormBase Tree Display for Sequence: D2089
expand all nodes | collapse all nodes | view schema
| D2089 | DNA | D2089 | 34733 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00001522 | 34099 | 30748 | |
| WBGene00008433 | 1288 | 521 | ||||
| WBGene00004207 | 15898 | 30578 | ||||
| WBGene00271706 | 3077 | 2541 | ||||
| WBGene00200494 | 27080 | 26868 | ||||
| WBGene00008434 | 5427 | 3829 | ||||
| WBGene00197694 | 15794 | 15645 | ||||
| CDS_child (211) | ||||||
| Transcript | D2089.6 | 15794 | 15645 | |||
| D2089.7 | 27080 | 26868 | ||||
| D2089.2.1 | 1288 | 521 | ||||
| D2089.3.1 | 5427 | 3829 | ||||
| D2089.4a.1 | 15898 | 30578 | ||||
| D2089.4b.1 | 26651 | 30086 | ||||
| D2089.5.1 | 34099 | 30748 | ||||
| D2089.8.1 | 3077 | 2541 | ||||
| Nongenomic | yk394e4 | 30810 | 34101 | |||
| PCR_product (17) | ||||||
| Allele (575) | ||||||
| Oligo_set | Aff_D2089.1 | 1819 | 2418 | |||
| Aff_D2089.2 | 1255 | 670 | ||||
| Aff_D2089.3 | 4391 | 2604 | ||||
| Aff_D2089.4 | 28292 | 30086 | ||||
| Aff_D2089.5 | 31757 | 30822 | ||||
| Feature_object (227) | ||||||
| Feature_data | D2089:Polysome | 1 | 34733 | |||
| D2089:TranscriptionallyActiveRegion | 1 | 34733 | ||||
| D2089:ChIPSeqTF | 1 | 34733 | ||||
| D2089:TRF | 1 | 34733 | ||||
| D2089:Dust | 1 | 34733 | ||||
| D2089:inverted | 1 | 34733 | ||||
| Homol_data (17) | ||||||
| Structure | From | Source | CHROMOSOME_II | |||
| Overlap_right | C09G5 | 34633 | ||||
| Overlap_left | M28 | |||||
| Clone_left_end | D2089 | 1 | ||||
| C09G5 | 34633 | |||||
| DB_info | Database | EMBL | NDB_AC | Z36948 | ||
| NDB_SV | Z36948.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Swinburne J | ||||
| From_laboratory | HX | |||||
| Date_directory | 940629 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | D2089 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 48391e48825d0206d66db3428f343a26 | ||||
| Status | Finished | 29 Jun 1994 00:00:00 | ||||
| Submitted | 06 Sep 1994 00:00:00 | |||||
| Annotated | 25 Aug 1994 00:00:00 | |||||
| Map | Sequence-II | Ends | Left | 6315 | ||
| Right | 6349 | |||||
| Interpolated_map_position | II | 3.12329 | ||||
| Assembly_tags | cosmid vector | 1 | 16 | Beginning of D2089 | ||
| 34633 | 34649 | Beginning of C09G5 | ||||
| annotation | 1 | 16 | ||||
| 19197 | 19208 | This clone is missing TG with respect to the others in this well covered region. I couldn't do a terminator reaction on the clone as the second prep wasn't the same (!) | ||||
| 34633 | 34649 | |||||
| Method | Genomic_canonical |
