WormBase Tree Display for Gene: WBGene00280007

WBGene00280007 SMap: S_parent: Sequence: PPA_ChrIV
  Identity: Version: 1
    Name: Sequence_name: PPA41638
      Molecular_name: PPA41638
        PPA41638.1
        PP53689
      Public_name: PPA41638
    Species: Pristionchus pacificus
    History: Version_change: 1 24 Nov 2017 16:14:22 WBPerson4055 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000032 1.09134 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0.36378 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Ortholog: WBGene00151301 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00153945 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00222371 Brugia malayi From_analysis: WormBase-Compara
      WBGene00000661 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00236792 Caenorhabditis japonica From_analysis: WormBase-Compara
      CBOVI.g10080 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP28.g17902 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10972 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g6601 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g14465 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g196 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8574 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01835.g23421 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_06321 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001370 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00060974 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrII_pilon.g6317 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00203088 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276298 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276541 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279294 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281098 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281099 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093063 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095974 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096298 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00272028 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Collagen triple helix repeat; Serpentine type 7TM GPCR chemoreceptor Sri; 7TM GPCR, serpentine chemoreceptor class i (Sri); and Collagen triple helix repeat (20 copies). Is an ortholog of C. elegans col-47. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA41638
    Corresponding_transcript: PPA41638.1
    Other_sequence: ASC33089_1
      FE914849.1
      FE912341.1
      FE913863.1
      FE914782.1
  Experimental_info: Microarray_results: GPL14372_Probes_89690
  Method: Gene