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WormBase Tree Display for Gene: WBGene00245651

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Name Class

WBGene00245651SMapS_parentSequenceOVOC_OM3_79
IdentityVersion1
NameSequence_nameOVOC8842
Molecular_nameOVOC8842
OVOC8842.1
OVP12124
Public_nameOVOC8842
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:34WBPerson3111EventImportedMAKER import
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00001016.90779From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
8.09175From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.46694From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
0.822941From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
0.936805From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
1.00111From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
12.1255From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
1.35511From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
14.5706From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
17.0394From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
2.83406From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
5.2332From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
5.56842From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
6.17662From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
6.58399From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
7.2316From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
7.64301From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
9.23666From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
WBls:00001076.46379From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010811.5946From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
14.9049From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
16.3864From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
16.7337From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:000066414.3909From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
17.0953From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
19.7997From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
OrthologWBGene00153660Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00029054Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00224845Brugia malayiFrom_analysisWormBase-Compara
WBGene00010307Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00133519Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g5892Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14088Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g8306Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g20171Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g3385Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25907Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1805Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g20901Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g3441Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g6760Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00051.g2649Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-skat-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g8704Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01240.g19510Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18962Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009285Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04976Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g4571Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30250300Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_30251500Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_30256300Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_30256400Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_30256500Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00055227Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00114175Pristionchus pacificusFrom_analysisWormBase-Compara
chrIII_pilon.g8521Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00263212Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286618Trichuris murisFrom_analysisWormBase-Compara
WBGene00290247Trichuris murisFrom_analysisWormBase-Compara
WBGene00290249Trichuris murisFrom_analysisWormBase-Compara
WBGene00290965Trichuris murisFrom_analysisWormBase-Compara
WBGene00301830Trichuris murisFrom_analysisWormBase-Compara
WBGene00301832Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00236843Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243228Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245562Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246397Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246496Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246592Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247232Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247233Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247296Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Transmembrane amino acid transporter protein; Anaphase-promoting complex subunit 4, WD40 domain; Anaphase-promoting complex, cyclosome, subunit 4; Anaphase-promoting complex subunit 4 WD40 domain; Anaphase-promoting complex subunit 4 long domain; Amino acid transporter, transmembrane domain; and WD40/YVTN repeat-like-containing domain superfamily. Is an ortholog of C. elegans skat-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC8842
Corresponding_transcriptOVOC8842.1
Other_sequenceHG00327
HBC24475_1
HGC11112_1
HG04291
Dviv_isotig33332
Hbac_isotig05111
HG01258
EX912830.1
JI165423.1
JI172253.1
BUC01028_1
JI465712.1
CJC08897_1
CBC11098_1
JI166227.1
HGC04898_1
BXC07327_1
Oden_isotig20657
CR04100
CRC05868_1
PPC03876_1
Hbac_isotig06926
JI471495.1
MethodGene