WormBase Tree Display for Gene: WBGene00010307

WBGene00010307 SMap: S_parent: Sequence: F59B2
  Identity: Version: 2
    Name: CGC_name: skat-1 Paper_evidence: WBPaper00044433
          Person_evidence: WBPerson545
      Sequence_name: F59B2.2
      Molecular_name: F59B2.2
        F59B2.2.1
        CE20899
      Other_name: CELE_F59B2.2 Accession_evidence: NDB BX284603
      Public_name: skat-1
    DB_info: Database: AceView gene 3K84
        WormQTL gene WBGene00010307
        WormFlux gene WBGene00010307
        NDB locus_tag CELE_F59B2.2
        Panther gene CAEEL|WormBase=WBGene00010307|UniProtKB=P34479
          family PTHR22950
        NCBI gene 176271
        RefSeq protein NM_066588.7
        SwissProt UniProtAcc P34479
        UniProt_GCRP UniProtAcc P34479
        OMIM gene 608331
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 18 Nov 2013 10:40:57 WBPerson2970 Name_change: CGC_name: skat-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: skat
    Allele (29)
    Strain: WBStrain00051206
    RNASeq_FPKM (74)
    GO_annotation: 00042614
      00042615
      00042616
      00042617
      00042618
      00042619
      00042620
    Contained_in_operon: CEOP3564
    Ortholog (61)
    Paralog (14)
    Structured_description: Automated_description: Predicted to enable L-amino acid transmembrane transporter activity. Predicted to be involved in amino acid transmembrane transport. Predicted to be located in vacuolar membrane. Expressed in head neurons; intestine; tail neurons; ventral cord neurons; and vulval muscle. Human ortholog(s) of this gene implicated in iminoglycinuria. Is an ortholog of several human genes including SLC36A1 (solute carrier family 36 member 1); SLC36A2 (solute carrier family 36 member 2); and SLC36A4 (solute carrier family 36 member 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0112265 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:18762)
  Molecular_info: Corresponding_CDS: F59B2.2
    Corresponding_transcript: F59B2.2.1
    Other_sequence (16)
    Associated_feature: WBsf227216
  Experimental_info: RNAi_result: WBRNAi00016077 Inferred_automatically: RNAi_primary
      WBRNAi00033182 Inferred_automatically: RNAi_primary
      WBRNAi00005013 Inferred_automatically: RNAi_primary
      WBRNAi00049145 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr11365
      Expr1017749
      Expr1034498
      Expr1152890
      Expr2015829
      Expr2034062
    Drives_construct: WBCnstr00031518
    Construct_product: WBCnstr00031518
    Microarray_results (19)
    Expression_cluster (90)
    Interaction (31)
  Map_info: Map: III Position: 0.058404
    Positive: Positive_clone: F59B2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00002911
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene