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WormBase Tree Display for Gene: WBGene00196892

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Name Class

WBGene00196892SMapS_parentSequenceC18D1
IdentityVersion1
NameSequence_nameC18D1.12
Molecular_nameC18D1.12
Other_nameCELE_C18D1.12Accession_evidenceNDBBX284602
Public_nameC18D1.12
DB_infoDatabaseNDBlocus_tagCELE_C18D1.12
NCBIgene13186690
RefSeqproteinNR_051572.1
RNAcentralURSidURS000022A2BF
SpeciesCaenorhabditis elegans
HistoryVersion_change106 Oct 2010 16:59:20WBPerson4025EventCreated
StatusLive
Gene_infoBiotypeSO:0001263
AlleleWBVar01499702
WBVar01498435
WBVar02130584
WBVar01500112
WBVar01500113
WBVar00760191
WBVar00760192
WBVar01498940
WBVar01666583
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionIs affected by mrps-5 based on RNA-seq studies. Is affected by silicon dioxide nanoparticle and Oligosaccharides based on microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptC18D1.12
Associated_featureWBsf666010
Experimental_infoExpression_clusterWBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00064306:Agaro-oligosaccharides_upregulated
Map_infoPositivePositive_cloneC18D1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII1.87521
Remark[101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper.Paper_evidenceWBPaper00037953
Accession_evidencemodENCODEncRNA_frag1418
Curator_confirmedWBPerson4025
MethodGene