WormBase Tree Display for Gene: WBGene00194680
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| WBGene00194680 | SMap | S_parent | Sequence | Y17D7C | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | Y17D7C.6 | ||||||||
| Molecular_name | Y17D7C.6a | |||||||||
| Y17D7C.6a.1 | ||||||||||
| CE48062 | ||||||||||
| Y17D7C.6b | ||||||||||
| Other_name | CELE_Y17D7C.6 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y17D7C.6 | |||||||||
| DB_info | Database | NDB | locus_tag | CELE_Y17D7C.6 | ||||||
| NCBI | gene | 13218291 | ||||||||
| RefSeq | protein | NR_102117.1 | ||||||||
| NM_001277002.3 | ||||||||||
| TrEMBL | UniProtAcc | K7ZUN4 | ||||||||
| UniProt_GCRP | UniProtAcc | K7ZUN4 | ||||||||
| RNAcentral | URSid | URS0000614511 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 15 Jun 2009 16:31:44 | WBPerson4025 | Event | Split_from | WBGene00012455 | |||
| 2 | 01 Oct 2012 14:46:50 | WBPerson4025 | Event | Changed_class | Pseudogene | CDS | ||||
| Split_from | WBGene00012455 | |||||||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001217 | ||||||||
| Allele (162) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | chrV_pilon.g17744 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g17745 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaapppa; ABalaappppa; neurons; rectal epithelial cell; and rectum based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including rrf-3; sek-1; and pgl-1 based on RNA-seq and microarray studies. Is affected by eight chemicals including stavudine; Zidovudine; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS | Y17D7C.6a | ||||||||
| Corresponding_transcript | Y17D7C.6b | |||||||||
| Y17D7C.6a.1 | ||||||||||
| Corresponding_pseudogene_history | Y17D7C.6:wp224 | |||||||||
| Other_sequence | JI219309.1 | |||||||||
| Associated_feature | WBsf647688 | |||||||||
| WBsf662205 | ||||||||||
| WBsf1002991 | ||||||||||
| WBsf1002992 | ||||||||||
| WBsf1002993 | ||||||||||
| WBsf1002994 | ||||||||||
| WBsf1021533 | ||||||||||
| WBsf1021534 | ||||||||||
| WBsf1021535 | ||||||||||
| WBsf1021536 | ||||||||||
| Experimental_info | RNAi_result | WBRNAi00055567 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00020076 | Inferred_automatically | RNAi_primary | ||||||||
| Expr_pattern | Expr2007103 | |||||||||
| Expr2025331 | ||||||||||
| Microarray_results (15) | ||||||||||
| Expression_cluster (80) | ||||||||||
| Map_info | Positive | Positive_clone | Y17D7C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | V | 17.3982 | ||||||||
| Method | Gene |
