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WormBase Tree Display for Gene: WBGene00164543

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Name Class

WBGene00164543SMapS_parentSequenceCbre_Contig36
IdentityVersion1
NameSequence_nameCBN25818
Molecular_nameCBN25818
CBN25818.1
CN26931
Public_nameCBN25818
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:52WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000212.2562From_analysisRNASeq.brenneri.WBls:0000002.control_median
15.4931From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
16.4433From_analysisRNASeq.brenneri.WBls:0000002.control_mean
19.6423From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
28.3867From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
2.99756From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
35.6569From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
46.9047From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
6.33214From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
9.01924From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
RNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:000002410.5094From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
19.5275From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
21.4764From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
23.8687From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
8.63048From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
WBls:000003827.0745From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
30.5599From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
34.0454From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:000004110.0673From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
1.26847From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
13.6106From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
1.47002From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
1.53384From_analysisRNASeq.brenneri.WBls:0000041.control_median
1.59766From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
16.282From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
2.43298From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
2.88315From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
3.65101From_analysisRNASeq.brenneri.WBls:0000041.control_mean
4.28611From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
4.51784From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
WBls:00001012.88315From_analysisRNASeq.brenneri.total_over_all_stages.control_median
9.16028From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
OrthologWBGene00008492Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00008495Caenorhabditis elegansFrom_analysisTreeFam
WBGene00012727Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00039731Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00057639Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00124497Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CSP26.g13229Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1333Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP39.g8302Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8303Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g5613Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_II.g6722Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00020.g1209Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_06899Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005753Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_20065920Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00092346Pristionchus pacificusFrom_analysisWormBase-Compara
chrII_pilon.g6462Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00140120Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00143525Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00145140Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00147778Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00148547Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00151422Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00151427Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00152199Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00153652Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00158007Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00158134Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00159702Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00160467Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00160549Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00193346Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00192663Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00139902Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00141918Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00142013Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00142092Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00142975Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00143012Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00143207Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00144569Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00146112Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00146237Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00146924Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00148843Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00148917Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00149416Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00151076Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00152453Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00153239Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00153815Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00156479Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00156841Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158009Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00160879Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00161111Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162477Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00163561Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164458Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164768Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164900Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192001Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. Is an ortholog of C. elegans F01D5.1. In C. elegans, F01D5.1 is involved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN25818
Corresponding_CDS_historyCBN25818:np198
Corresponding_transcriptCBN25818.1
Experimental_infoMicroarray_resultsGPL14142_CBN25818_327-386_0.962_1_A
MethodGene