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WormBase Tree Display for Gene: WBGene00057639

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Name Class

WBGene00057639SMapS_parentSequenceCrem_Contig51
IdentityVersion2
NameSequence_nameCRE04106
Molecular_nameCRE04106
CRE04106.1
RP33055
Other_namecr01.sctg9.wum.365
Public_nameCRE04106
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:45:13WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE04106
Other_namecr01.sctg9.wum.365
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000040From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
RNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
WBls:0000024 (53)
WBls:000002731.0356From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
32.51From_analysisRNASeq.remanei.WBls:0000027.control_mean
37.4019From_analysisRNASeq.remanei.WBls:0000027.control_median
43.7681From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
47.0968From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
8.13935From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003811.3084From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
57.6909From_analysisRNASeq.remanei.WBls:0000038.control_mean
76.4821From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
85.2823From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004111.2893From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
14.0246From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
18.0379From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
39.6548From_analysisRNASeq.remanei.WBls:0000041.control_median
41.222From_analysisRNASeq.remanei.WBls:0000041.control_mean
61.2717From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
66.0039From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
76.7044From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:000010118.4223From_analysisRNASeq.remanei.total_over_all_stages.control_median
28.0609From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (20)
Paralog (52)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. Is an ortholog of C. elegans F01D5.1 and Y39G8B.7. In C. elegans, F01D5.1 is involved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE04106
Corresponding_transcriptCRE04106.1
Other_sequenceCSC00079_1
FD514091.1
Experimental_infoExpr_patternExpr1098098
Microarray_resultsGPL14146_CRE04106_913-972_0.950_1_A
MethodGene