WormBase Tree Display for Gene: WBGene00151753

WBGene00151753 SMap: S_parent: Sequence: Cbre_Contig166
  Identity: Version: 2
    Name: CGC_name: Cbn-sup-17.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN13028
      Molecular_name: CBN13028
        CBN13028.1
        CN07784
      Public_name: Cbn-sup-17.1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-sup-17.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sup
    RNASeq_FPKM: WBls:0000002 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        3.85988 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        4.92938 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        5.33413 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        5.41859 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        5.51013 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        5.60166 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        6.05366 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        6.61867 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        7.24939 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        9.1578 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        20.393 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        40.7861 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 10.0579 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        10.674 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        6.43419 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        9.22607 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        9.65183 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 11.6093 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        11.9228 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        12.2364 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 10.4646 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
        11.4458 From_analysis: RNASeq.brenneri.WBls:0000041.control_mean
        14.1539 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
        15.1331 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
        19.7556 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
        2.08609 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
        21.4539 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
        2.40547 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
        2.41629 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
        3.25242 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
        3.53254 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
        38.381 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
        38.7539 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
        5.49183 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
        5.67224 From_analysis: RNASeq.brenneri.WBls:0000041.control_median
        5.85265 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
      WBls:0000101 5.60166 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        9.58254 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00212748
    Ortholog: WBGene00006324 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00033327 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00060001 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00112423 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00130009 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g9188 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4880 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g10138 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1590 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17578 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g7735 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g5531 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21176 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1410 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g17720 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g19404 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g24243 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00186.g6518 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-sup-17 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g20539 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01411.g20755 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_05079 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_002527 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06191 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g15811 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10124010 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00223337 Brugia malayi From_analysis: WormBase-Compara
      chrI_pilon.g1674 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237507 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00259523 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00293620 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00158824 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00155271 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00158339 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00161017 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00162861 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00163952 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00164245 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable metallopeptidase activity. Is an ortholog of C. elegans sup-17. In C. elegans, sup-17 is involved in several processes, including nematode male tail tip morphogenesis; positive regulation of transforming growth factor beta receptor signaling pathway; and vulval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN13028
    Corresponding_transcript: CBN13028.1
    Other_sequence: Acan_isotig08167
      JI165558.1
      Dviv_isotig23060
      ACC09332_1
      EY471988.1
      HBC08024_1
      ES739034.1
      JI463193.1
  Method: Gene