WormBase Tree Display for Gene: WBGene00150958

WBGene00150958 SMap: S_parent: Sequence: Cbre_Contig28
  Identity: Version: 2
    Name: CGC_name: Cbn-crn-5 From_analysis: Inferred_from_orthology
      Sequence_name: CBN12233
      Molecular_name: CBN12233
        CBN12233.1
        CN27496
      Public_name: Cbn-crn-5
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-crn-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: crn
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 12.4465 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        24.893 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 11.7977 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        17.1009 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        23.5005 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        26.4282 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        28.686 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
      WBls:0000038 20.1825 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        21.2341 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        22.2857 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (16)
      WBls:0000101 17.2908 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        9.32536 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    Ortholog (28)
    Paralog: WBGene00153454 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00161775 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00190767 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Exoribonuclease, PH domain 2 superfamily; 3' exoribonuclease family, domain 2; Exoribonuclease, phosphorolytic domain 2; PNPase/RNase PH domain superfamily; 3' exoribonuclease family, domain 1; Exoribonuclease, phosphorolytic domain 1; and Ribosomal protein S5 domain 2-type fold. Is an ortholog of C. elegans crn-5. In C. elegans, crn-5 is involved in RNA processing and apoptotic DNA fragmentation. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN12233
    Corresponding_CDS_history: CBN12233:np197
    Corresponding_transcript: CBN12233.1
    Other_sequence: CBC01241_1
      Hbac_isotig03698
      CJC05327_1
      CGC00890_1
      Oden_isotig26749
      EX010442.1
  Experimental_info: Microarray_results: GPL14142_CBN12233_307-366_0.943_1_A
      GPL14142_CBN12233_406-465_0.927_9_B
      GPL14142_CBN12233_586-645_0.928_5_C
  Method: Gene