WormBase Tree Display for Gene: WBGene00150853

WBGene00150853 SMap: S_parent: Sequence: Cbre_Contig1025
  Identity: Version: 2
    Name: Sequence_name: CBN12128
      Molecular_name: CBN12128
        CBN12128.1
        CN09329
      Other_name: CBN12128
      Public_name: CBN12128
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-ketn-1
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Removed
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000002 1.18971 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        1.211 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        1.32066 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        1.95893 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        2.06264 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        2.59719 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        3.0602 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        3.32266 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        3.69539 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        4.22958 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
      WBls:0000004 0.026331 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0.052662 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        3.94378 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        3.98543 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        5.47235 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        5.87032 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        6.91389 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 0.143571 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        0.167479 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        0.191386 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 0.393386 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
        0.485871 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
        0.736982 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
        0.915055 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
        1.09585 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
        15.4035 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
        2.5988 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
        2.79187 From_analysis: RNASeq.brenneri.WBls:0000041.control_median
        2.98494 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
        3.02978 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
        3.46545 From_analysis: RNASeq.brenneri.WBls:0000041.control_mean
        4.43753 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
        4.4401 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
        5.18061 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
        6.2015 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
        7.54334 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
      WBls:0000101 1.211 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        2.46649 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog: CSP21.g3282 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g8257 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g8259 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15522 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10308 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g10590 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15088 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g15090 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g10645 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g13329 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g15901 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g22308 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g4993 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g15584 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_08688.g21651 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_09430.g22060 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_14693.g24754 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_27033.g27493 Caenorhabditis angaria From_analysis: WormBase-Compara
      Csp11.Scaffold629.g7635 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00294.g8856 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_05350 Caenorhabditis latens From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05177 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g14400 Panagrellus redivivus From_analysis: WormBase-Compara
      WBGene00004130 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00028613 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00058071 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00115220 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00231575 Brugia malayi From_analysis: WormBase-Compara
      chrV_pilon.g13554 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00210506 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00243987 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00258853 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00297373 Trichuris muris From_analysis: WormBase-Compara
      WBGene00299169 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00143634 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00145591 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00145978 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00150614 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00150884 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00154265 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00154570 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00185039 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00185040 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00190119 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00190699 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00191678 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00191686 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00191900 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00192065 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00193422 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00193565 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00193977 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00193996 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00142285 Caenorhabditis brenneri From_analysis: GeneACeDB-Compara
      WBGene00148619 Caenorhabditis brenneri From_analysis: GeneACeDB-Compara
      WBGene00192059 Caenorhabditis brenneri From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Immunoglobulin I-set domain; Immunoglobulin I-set; Immunoglobulin-like fold; Immunoglobulin subtype 2; Immunoglobulin-like domain superfamily; and Immunoglobulin subtype. Is an ortholog of C. elegans ketn-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN12128
    Corresponding_transcript: CBN12128.1
    Other_sequence: CBC06996_1
      ACC09543_1
      FC817084.1
      AW288147.1
      CJC08962_1
      SS03012
      Hbac_isotig02818
      EY463220.1
      EX556551.1
      BMC09729_1
      JI164350.1
      EX540615.1
      SS02656
      SS02701
      BF727511.1
      HCC00934_1
      SSC05816_1
      HC02701
      ACC08594_1
      EY468321.1
      OVC03471_1
      SSC03877_1
      SSC06128_1
      Tcol_isotig02782
      HC04265
      HCC02708_1
      SR02987
  Experimental_info: Microarray_results: GPL14142_CBN12128_3156-3215_0.840_77_C
      GPL14142_CBN12128_3465-3524_0.893_26_B
      GPL14142_CBN12128_3747-3806_0.790_179_A
  Remark: [180319 gw3] The CGC name Cbn-ketn-1 was deleted as there was no evidence to support it. This name has correctly been assigned to WBGene00185039 Curator_confirmed: WBPerson4025
  Method: Gene