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WormBase Tree Display for Gene: WBGene00146306

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Name Class

WBGene00146306SMapS_parentSequenceCbre_Contig333
IdentityVersion1
NameCGC_nameCbn-ocrl-1From_analysisInferred_from_orthology
Sequence_nameCBN07581
Molecular_nameCBN07581
CBN07581.1
CN19392
Other_nameCBN07581
Public_nameCbn-ocrl-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-ocrl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classocrl
RNASeq_FPKMWBls:000000210.6623From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
2.79657From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
3.03426From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
4.1988From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
4.28058From_analysisRNASeq.brenneri.WBls:0000002.control_mean
4.39094From_analysisRNASeq.brenneri.WBls:0000002.control_median
4.58308From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
5.79804From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
5.83466From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
5.89805From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
WBls:00000041.48211From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
2.96422From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:000002410.4658From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
6.66198From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
8.43456From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
9.05187From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
9.34579From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:00000386.07025From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
6.58513From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
7.10002From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:000004112.5813From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
1.83509From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
2.05007From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
20.997From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
21.3949From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
2.1453From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
3.27704From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
3.59076From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
3.89311From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
4.50938From_analysisRNASeq.brenneri.WBls:0000041.control_median
5.12564From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
5.31846From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
5.52332From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
6.12814From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
6.38224From_analysisRNASeq.brenneri.WBls:0000041.control_mean
8.25564From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
WBls:00001014.1988From_analysisRNASeq.brenneri.total_over_all_stages.control_median
5.19535From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00208292
00208293
00208294
00208295
OrthologWBGene00007620Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00026596Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00079802Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g10306Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g15209Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3687Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7782Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g13515Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g19282Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8013Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g11531Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g657Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20208Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00241.g7685Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-ocrl-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_I.g1362Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15324Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00607.g13491Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_20169Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_000596Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11805Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g5395Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10210000Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00096244Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00222504Brugia malayiFrom_analysisWormBase-Compara
WBGene00234752Brugia malayiFrom_analysisWormBase-Compara
chrI_pilon.g1892Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00181203Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00237952Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00263312Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00263572Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00291998Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00158191Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00190809Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00143984Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00151376Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154815Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00156885Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162968Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192008Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193868Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable phosphatase activity. Predicted to be involved in phosphatidylinositol dephosphorylation and signal transduction. Is an ortholog of C. elegans ocrl-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN07581
Corresponding_transcriptCBN07581.1
Other_sequenceOden_isotig28877
Oden_isotig12949
ACC08467_1
SR03562
FC545797.1
FC818815.1
Dviv_isotig15620
Dviv_isotig15417
Oden_isotig12948
JI172034.1
Dviv_isotig15418
Dviv_isotig15619
Experimental_infoMicroarray_resultsGPL14142_CBN07581_1018-1077_0.727_188_A
MethodGene