WormBase Tree Display for Gene: WBGene00142088

WBGene00142088 SMap: S_parent: Sequence: Cbre_Contig12
  Identity: Version: 6
    Name: CGC_name: Cbn-dod-6.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN03363
      Molecular_name: CBN03363
        CBN03363.1
        CN25009
      Other_name: CBN03363
        Cbn-dod-6 From_analysis: Inferred_from_orthology
      Public_name: Cbn-dod-6.1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-dod-6
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-dod-6.1
                Other_name: Cbn-dod-6
        3 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:27 WBPerson1983 Name_change: CGC_name: Cbn-dod-6.1
        5 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cbn-dod-6.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dod
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0.769905 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        1.53981 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        49.4137 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        50.4846 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        53.398 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        55.2955 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        55.6342 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 224.541 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        225.673 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        226.804 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 60.6341 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        74.7587 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog: WBGene00011869 Caenorhabditis elegans From_analysis: OMA
            WormBase-Compara
      WBGene00011870 Caenorhabditis elegans From_analysis: OMA
      WBGene00031323 Caenorhabditis briggsae From_analysis: OMA
            WormBase-Compara
      WBGene00085206 Caenorhabditis remanei From_analysis: OMA
      WBGene00085211 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
      WBGene00087292 Caenorhabditis briggsae From_analysis: Inparanoid_8
      CSP31.g20309 Caenorhabditis uteleia From_analysis: WormBase-Compara
      Sp34_30209210 Caenorhabditis inopinata From_analysis: WormBase-Compara
    Paralog: WBGene00193272 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. Is an ortholog of C. elegans dod-6. In C. elegans, dod-6 is involved in pharyngeal gland morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN03363
    Corresponding_transcript: CBN03363.1
    Other_sequence: CBC14050_1
      FD517664.1
      CSC01049_1
      FD517327.1
  Experimental_info: Microarray_results: GPL14142_CBN03363_12-71_0.593_7_B
      GPL14142_CBN03363_124-183_0.724_2_C
      GPL14142_CBN03363_127-186_0.826_1_A
  Remark: [190208 pad] The CGC name Cbn-dod-6.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cbn-dod-6.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene