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WormBase Tree Display for Gene: WBGene00139841

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Name Class

WBGene00139841SMapS_parentSequenceCbre_Contig98
IdentityVersion2
NameCGC_nameCbn-unc-87.2From_analysisInferred_from_orthology
Sequence_nameCBN01116
Molecular_nameCBN01116
CBN01116.1
CN07075
Public_nameCbn-unc-87.2
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:50WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameCbn-unc-87.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000020From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
35.5456From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
38.8436From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
39.0551From_analysisRNASeq.brenneri.WBls:0000002.control_mean
39.0779From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
42.6875From_analysisRNASeq.brenneri.WBls:0000002.control_median
46.297From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
51.4219From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
52.4766From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
62.7857From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
64.103From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
WBls:00000040.68212From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
1.36424From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:0000024113.144From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
169.63From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
193.836From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
200.874From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
84.274From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
WBls:0000038188.002From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
192.363From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
196.725From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041100.745From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
110.718From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
221.843From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
225.914From_analysisRNASeq.brenneri.WBls:0000041.control_mean
243.237From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
245.955From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
254.357From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
265.033From_analysisRNASeq.brenneri.WBls:0000041.control_median
275.709From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
286.44From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
288.79From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
288.838From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
294.565From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
323.428From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
327.004From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
353From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
WBls:0000101100.745From_analysisRNASeq.brenneri.total_over_all_stages.control_median
141.654From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
OrthologWBGene00006819Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00033672Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00056204Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00131525Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g10647Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10883Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g19887Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g3027Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16920Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g4194Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g6900Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9538Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g9343Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g5924Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00461.g11128Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_07630.g21019Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-87Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold539.g3338Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01032.g17751Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_13431Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001883Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05654Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g9856Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10342810Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00096231Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00223447Brugia malayiFrom_analysisWormBase-Compara
chrI_pilon.g1238Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00237669Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00262120Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288562Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00138970Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00158496Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00158373Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00145561Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00148010Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00148319Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00153291Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157878Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00159661Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162625Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00163191Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Calponin family repeat and Calponin repeat. Is an ortholog of C. elegans unc-87. In C. elegans, unc-87 is involved in actin cytoskeleton organization and negative regulation of muscle filament sliding.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN01116
Corresponding_transcriptCBN01116.1
Other_sequenceCBC02996_1
PVC00102_1
HG08291
MJ04069
CJC07721_1
MH02574
EX915510.1
PE00222
MA00603
HC02273
HC01641
HSC01090_1
GO239020.1
HCC10408_1
FC816270.1
SSC02437_1
HSC00784_1
Dviv_isotig23968
MHC11104_1
HC01069
MJ00070
MJ02455
MHC00493_1
MH02608
GRC00426_2
MAC01655_1
Name_isotig01300
HG03517
MIC03107_1
GO249730.1
MHC01579_1
HCC00207_1
MJ02513
CR01939
PVC00485_1
AS09084
EG025382.1
MHC00100_1
BXC00115_1
EX546914.1
MI04867
HGC01539_1
HSC00292_1
MI05479
HC01902
AY672636.1
FK801064.1
PEC00079_1
MJC02562_1
MJ03919
MH07851
HG00679
MH08479
AW506231.1
GRC00426_1
TDC01741_1
CV199495.1
MI01119
MAC00642_1
FG589562.1
HGC05732_1
HSC00238_1
HS00465
FK808362.1
GU130147.1
SS01345
HC06121
HS01497
MIC00003_2
FC816456.1
AF193869.1
GO238938.1
MCC01950_1
JI171444.1
EX564251.1
MA02343
CGC01139_1
TX00515
TCC00753_1
MJ02987
HBC24237_1
BUC01226_1
CV201014.1
BMC11213_1
CV200932.1
PPC07549_1
SR00848
OOC00248_1
MJC03387_1
OOC01006_1
CJC04070_1
CV200774.1
GR367759.1
ES742885.1
MHC12537_1
RSC04225_1
CJC00033_1
MI04828
HS00679
MJ03024
GR13363
OOC00600_1
EX915931.1
MAC01318_1
HC02399
HS00461
GO238987.1
MH08613
MAC00277_1
MA01334
FF679050.1
MJ03306
SRC00371_1
MA02369
PSC04739_1
HGC01263_1
MH07589
MIC04342_1
MIC00928_1
HG08728
AS09125
MI04771
GO249388.1
FC818468.1
FK810000.1
NB06669
HC02417
GO238942.1
MJ00520
MA01612
MI03419
CV201029.1
FK802078.1
Oden_isotig19311
MJ02951
EE724189.1
MJ02751
MH02933
CJC15168_1
MC03779
AM743386.1
BE239170.1
MI04859
GW409578.1
EX916037.1
NBC00078_1
BXC07124_1
CJC10161_1
CJC05191_1
FK808176.1
EX549798.1
GRC01098_1
MethodGene