Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00139400

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00139400SMapS_parentSequenceCbre_Contig53
IdentityVersion1
NameCGC_nameCbn-unc-10From_analysisInferred_from_orthology
Sequence_nameCBN00675
Molecular_nameCBN00675
CBN00675.1
CN17997
Other_nameCBN00675
Public_nameCbn-unc-10
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:29WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-unc-10
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000020.393778From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
0.41792From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
0.517664From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
0.823872From_analysisRNASeq.brenneri.WBls:0000002.control_median
0.824316From_analysisRNASeq.brenneri.WBls:0000002.control_mean
1.13008From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
1.26943From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
1.37001From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
1.54179From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
1.60249From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
WBls:00000040.7788From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
1.5576From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:000002410.5438From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
13.9761From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
15.9723From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
17.1549From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
17.6703From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
WBls:00000381.99836From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
2.08194From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
2.16553From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:00000410.178774From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
0.255141From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
0.323551From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
0.427971From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
0.515274From_analysisRNASeq.brenneri.WBls:0000041.control_median
0.602576From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
0.91953From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
0.930269From_analysisRNASeq.brenneri.WBls:0000041.control_mean
0.972909From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
1.59412From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
1.65772From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
1.86292From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
2.57488From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
3.51421From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
WBls:00001010.602576From_analysisRNASeq.brenneri.total_over_all_stages.control_median
0.930611From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00202698
00202699
00202700
OrthologWBGene00006750Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00032220Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00051358Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00135410Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g3825Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g1828Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g2185Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g20017Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2836Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20577Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g20578Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5642Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g5643Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g20645Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4509Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g21270Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_09484.g22094Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-10Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12505Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00022.g1323Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00207Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024741Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01557Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g13176Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0202100Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00089921Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00232519Brugia malayiFrom_analysisWormBase-Compara
chrX_pilon.g19374Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238655Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238656Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00257102Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00290044Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable small GTPase binding activity. Predicted to be involved in exocytosis. Predicted to be located in membrane. Is an ortholog of C. elegans unc-10. In C. elegans, unc-10 is involved in several processes, including chemical synaptic transmission; defecation; and positive regulation of cholinergic synaptic transmission.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN00675
Corresponding_transcriptCBN00675.1
Other_sequenceMH01422
MI00791
CRC10824_1
Hbac_isotig05841
MAC00635_1
MIC01418_1
MPC01319_1
XI02848
XIC03593_1
MHC00774_1
JI172813.1
CR03214
MI03211
CR07745
JI477660.1
CRC00807_1
BE238894.1
JI470433.1
JI169377.1
JI479979.1
MP01731
MI01766
MI02037
Oden_isotig21600
MHC09967_1
CN477467.1
MA01327
JI462590.1
JI177918.1
Dviv_isotig22484
MIC01500_1
JI476772.1
MA02180
JI467057.1
Dviv_isotig31769
Experimental_infoMicroarray_resultsGPL14142_CBN00675_2627-2686_0.815_75_C
GPL14142_CBN00675_4853-4912_0.954_1_A
GPL14142_CBN00675_4862-4921_0.909_14_B
MethodGene