WormBase Tree Display for Gene: WBGene00131242

WBGene00131242 SMap: S_parent: Sequence: Cjap.Contig17556
  Identity: Version: 6
    Name: CGC_name: Cjp-cpn-2 From_analysis: Inferred_from_orthology
      Sequence_name: CJA12038
      Molecular_name: CJA12038
        CJA12038.1
        JA06513
      Public_name: Cjp-cpn-2
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-cpn-2
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
        3 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:26 WBPerson1983 Name_change: CGC_name: Cjp-cpn-2
        5 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cjp-cpn-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cpn
    RNASeq_FPKM: WBls:0000004 79.25 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 2.97243 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 14.7613 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        16.2449 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        17.7286 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 1.40555 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        1.40779 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        1.42412 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        2.05475 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        2.16673 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        2.27872 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        2.58204 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        2.69626 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        5.1672 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        5.24993 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
      WBls:0000101 10.4833 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        2.58204 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog (40)
    Paralog: WBGene00122476 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00123334 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00128399 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00178953 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00129648 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00131525 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00136626 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Calponin family repeat; Calponin repeat; Smooth muscle protein/calponin; CH domain superfamily; Calponin homology domain; and Calponin homology (CH) domain. Is an ortholog of C. elegans cpn-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA12038
    Corresponding_transcript: CJA12038.1
    Other_sequence (31)
  Experimental_info: Expr_pattern: Expr1088886
    Microarray_results: GPL14145_CJA12038_240-299_0.830_9_B
      GPL14145_CJA12038_681-740_0.678_34_C
      GPL14145_CJA12038_695-754_0.826_10_A
  Remark: [190208 pad] The CGC name Cjp-cpn-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cjp-cpn-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene