WormBase Tree Display for Gene: WBGene00118558
expand all nodes | collapse all nodes | view schema
WBGene00118558 | SMap | S_parent | Sequence | PPA_ChrI | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 4 | |||||||
Name | Sequence_name | PPA29004 | |||||||
Molecular_name | PPA29004 | ||||||||
PPA29004.1 | |||||||||
PP51374 | |||||||||
Other_name | GENEPREDICTION_SNAP300000085797 | ||||||||
GENEPREDICTION_SNAP300000085992 | |||||||||
UMM-S278-10.42 | Person_evidence | WBPerson606 | |||||||
Public_name | PPA29004 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:07 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00118757 | ||||
3 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-ast-1.2 | ||||
4 | 28 Jul 2021 11:12:30 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
Acquires_merge | WBGene00118757 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
GO_annotation | 00186381 | ||||||||
00186382 | |||||||||
00186383 | |||||||||
Ortholog | WBGene00020368 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
WBGene00148495 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
WBGene00125789 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
WBGene00220335 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
WBGene00016798 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00242352 | Onchocerca volvulus | From_analysis | WormBase-Compara | ||||||
CSP40.g18905 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_01094.g18346 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
Pan_g23821 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
WBGene00289796 | Trichuris muris | From_analysis | WormBase-Compara | ||||||
Paralog (16) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity and sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans ast-1 and ets-8. In C. elegans, ast-1 is involved in several processes, including neuron differentiation; pharynx morphogenesis; and regulation of nematode male tail tip morphogenesis. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA29004 | |||||||
Corresponding_transcript | PPA29004.1 | ||||||||
Remark | [210728 pad] The CGC name Ppa-ast-1.2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
Method | Gene |