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WormBase Tree Display for Gene: WBGene00106477

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Name Class

WBGene00106477SMapS_parentSequencePPA_ChrI
IdentityVersion2
NameCGC_namePpa-unc-60
Sequence_namePPA16923
Molecular_namePPA16923
PPA16923.1
PP54423
Other_nameGENEPREDICTION_SNAP300000073641
UMM-S2842-7.8Person_evidenceWBPerson606
Public_namePpa-unc-60
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
218 Nov 2010 11:54:47WBPerson2970Name_changeCGC_namePpa-unc-60
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000328.23031From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010115.7089From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
38.8963From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
8.23031From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
GO_annotation00180781
00180782
00180783
OrthologWBGene00006794Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WBGene00028829Caenorhabditis briggsaeFrom_analysisOMA
WBGene00148085Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00138329Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00302979Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00222917Brugia malayiFrom_analysisWormBase-Compara
WBGene00302980Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00243201Onchocerca volvulusFrom_analysisWormBase-Compara
CSP21.g4631Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g5965Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP31.g18772Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g7044Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g20996Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g24084Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00124.g5035Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-60Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g11438Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00729.g14898Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_08361Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_019004Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00217Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08974Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g10617Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20034100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g13230Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00264397Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293581Trichuris murisFrom_analysisWormBase-Compara
WBGene00296127Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00092650Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable actin binding activity. Predicted to be involved in actin filament depolymerization. Predicted to be located in actin cytoskeleton. Is an ortholog of C. elegans unc-60. In C. elegans, unc-60 is involved in several processes, including actin filament-based process; embryo development; and positive regulation of actin filament polymerization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA16923
Corresponding_transcriptPPA16923.1
Other_sequenceFC812981.1
FC818692.1
Name_isotig00126
JI165457.1
HC00658
RSC04125_1
PTC04669_1
CBC03678_1
EX539535.1
PSC00239_1
EX010447.1
EX010504.1
EX915066.1
EX012319.1
FE912345.1
GPC00068_1
PT00723
HCC03343_1
TV00053
CBC04206_1
PT00920
GPC01018_1
XI00911
Tcol_isotig02270
MI09019
AYC03477_1
JI473194.1
PPC00511_1
PTC00164_1
ES412371.1
ES742222.1
MHC11528_1
GR11562
CB013214.1
ES742251.1
Name_isotig00124
XIC00202_1
GW409741.1
ES743077.1
Hbac_contig01381
EX014913.1
MI02884
EX009086.1
NBC00056_1
HGC00075_1
SSC02636_1
PTC00768_1
PPC02245_1
JI472422.1
GP00414
Name_isotig00125
Tcol_isotig02269
EY462591.1
TMC01379_1
Acan_isotig03353
EX913369.1
Name_isotig05231
PP02014
CRC04215_1
SR00358
CR02620
EX915077.1
EX012417.1
EX014545.1
GO251549.1
Dviv_isotig18571
EX914507.1
FC819277.1
DAC00378_1
MHC00893_1
GR367871.1
Acan_isotig03352
SS01043
JO467730.1
GR17761
GRC00263_1
ACC01754_1
EX915384.1
NB08291
RS06152
MH01448
AE03012
XIC01183_1
GO252279.1
FC818010.1
GO251527.1
HBC01800_1
Oden_isotig20371
GR19865
HG03135
ES411959.1
TVC00246_1
Dviv_isotig18570
PT04021
ES409140.1
EX566606.1
BE217612.1
XI01475
SRC03295_1
JI169215.1
MIC02397_1
JI468140.1
EX014479.1
MIC08730_1
GRC03483_1
GPC01128_1
GO251470.1
CJC05370_1
DA00006
BXC00246_1
HBC15063_1
MH05957
ASC38097_1
HG11102
EX914433.1
EX008914.1
Experimental_infoMicroarray_resultsGPL14372_Probes_61236
MethodGene