WormBase Tree Display for Gene: WBGene00104488

WBGene00104488 SMap: S_parent: Sequence: PPA_ChrV
  Identity: Version: 2
    Name: CGC_name: Ppa-lron-9 From_analysis: Inferred_from_orthology
      Sequence_name: PPA14934
      Molecular_name: PPA14934
        PPA14934.1
        PP71742
      Other_name: GENEPREDICTION_SNAP300000071395
        UMM-S435-0.44 Person_evidence: WBPerson606
      Public_name: Ppa-lron-9
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 09 Dec 2011 15:52:14 WBPerson2970 Name_change: CGC_name: Ppa-lron-9
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lron
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
            RNASeq.pristionchus.total_over_all_stages.control_mean
    Ortholog: WBGene00011971 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00023716 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00065433 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00141701 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00161551 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00127878 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00226155 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g10072 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7866 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g12261 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8655 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10864 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g17197 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8232 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2926 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g12471 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g4677 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g24446 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00209.g7050 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-lron-9 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g16891 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_04306.g32601 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_13139 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000034 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13102 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_10106900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1437 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00293766 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00092982 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00098483 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00106686 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Leucine-rich repeat; Leucine-rich repeat domain superfamily; Leucine rich repeat; and Leucine-rich repeat, typical subtype. Is an ortholog of C. elegans lron-9. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA14934
    Corresponding_transcript: PPA14934.1
    Other_sequence: Acan_isotig07498
      Oden_isotig22865
      Hbac_isotig05028
      Dviv_isotig27715
  Experimental_info: Microarray_results: GPL14372_Probes_1140
      GPL14372_Probes_1141
      GPL14372_Probes_1142
      GPL14372_Probes_1144
    Expression_cluster: WBPaper00064862:Ppa-sul-2(tu1069)_J4.12_Down
  Method: Gene