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WormBase Tree Display for Gene: WBGene00103561

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Name Class

WBGene00103561SMapS_parentSequencePPA_ChrIV
IdentityVersion4
NameCGC_namePpa-lea-1From_analysisInferred_from_orthology
Sequence_namePPA14007
Molecular_namePPA14007
PPA14007.1
PP51528
Other_nameGENEPREDICTION_SNAP300000070804
GENEPREDICTION_SNAP300000073438
GENEPREDICTION_SNAP300000073442
GENEPREDICTION_SNAP300000073443
UMM-S2847-5.22Person_evidenceWBPerson606
Public_namePpa-lea-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:50WBPerson4055EventAcquires_mergeWBGene00106267
324 Nov 2017 09:46:50WBPerson4055EventAcquires_mergeWBGene00106271
424 Nov 2017 09:46:50WBPerson4055EventAcquires_mergeWBGene00106272
Acquires_mergeWBGene00106272
WBGene00106267
WBGene00106271
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlea
RNASeq_FPKMWBls:00000320.762191From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.554093From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0.762191From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
0.900087From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
OrthologWBGene00002263Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WBGene00027418Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WBGene00063684Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WBGene00076750Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00085519Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00147331Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WBGene00144239Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WBGene00122416Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00192458Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00184656Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00194755Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00159222Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190821Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191266Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193054Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00024848Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00226680Brugia malayiFrom_analysisWormBase-Compara
WBGene00001492Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021406Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00126215Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133405Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00241351Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g11059Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g11061Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10653Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4516Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g4518Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g5564Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7129Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g12356Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g583Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g17356Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g6977Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g9685Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12998Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00191.g6653Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_01407.g16380Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_01599.g16574Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_11973.g23504Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g14696Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20137Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00227.g7490Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00227.g7492Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16329Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_014665Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_014667Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02720Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g8057Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40118400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00059503Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00077145Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIV_pilon.g9431Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIV_pilon.g9434Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIV_pilon.g9438Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00266990Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287142Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00113513Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: FERM C-terminal PH-like domain; FERM, C-terminal PH-like domain; FERM, N-terminal; FERM N-terminal domain; FERM central domain; FERM superfamily, second domain; FERM/acyl-CoA-binding protein superfamily; Ubiquitin-like domain superfamily; PDZ superfamily; Band 4.1 domain; PDZ domain; and KIND domain. Is an ortholog of C. elegans lea-1. In C. elegans, lea-1 is involved in hyperosmotic response; response to desiccation; and response to heat.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA14007
Corresponding_transcriptPPA14007.1
Other_sequenceDI00570
JO470232.1
AS10211
JI164446.1
Tcir_isotig15714
PPC15404_1
CBC08698_1
FC818262.1
Experimental_infoMicroarray_resultsGPL14372_Probes_23814
GPL14372_Probes_23815
GPL14372_Probes_23816
GPL14372_Probes_23818
GPL14372_Probes_23821
GPL14372_Probes_23822
GPL14372_Probes_76377
Expression_clusterWBPaper00041606:PP_X.nematophila_regulated
MethodGene