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WormBase Tree Display for Gene: WBGene00101285

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Name Class

WBGene00101285SMapS_parentSequencePPA_ChrIV
IdentityVersion5
NameCGC_namePpa-arf-5From_analysisInferred_from_orthology
Sequence_namePPA11731
Molecular_namePPA11731
PPA11731.1
PP72796
Other_nameGENEPREDICTION_SNAP300000068175
GENEPREDICTION_SNAP300000068176
GENEPREDICTION_SNAP300000084478
UMM-S230-3.11Person_evidenceWBPerson606
Ppa-unc-24From_analysisInferred_from_orthology
Ppa-arf-3From_analysisInferred_from_orthology
Public_namePpa-arf-5
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00101286
324 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00117217
420 Mar 2018 10:26:11WBPerson4025Name_changeCGC_namePpa-arf-3
Other_namePpa-unc-24
528 May 2021 19:05:19WBPerson1983Name_changeCGC_namePpa-arf-5
Other_namePpa-arf-3
Acquires_mergeWBGene00101286
WBGene00117217
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classarf
RNASeq_FPKMWBls:000003210.2489From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010110.2489From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
16.9866From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
40.7109From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00178579
00178580
00178581
00178582
00178583
00178584
OrthologWBGene00000183Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WBGene00006761Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00037282Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WBGene00037283Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00059388Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00059390Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WBGene00074033Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00139174Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WBGene00129660Caenorhabditis japonicaFrom_analysisOMA
Inparanoid_8
WBGene00141901Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00151578Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00119389Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00159773Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191445Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00024960Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00010354Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013381Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021200Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00128417Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g8724Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g5788Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13699Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13876Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7012Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5253Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g14457Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g890Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g26313Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g3530Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g9949Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00032.g1824Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g14545Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold589.g5030Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00422.g11149Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16027Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_014548Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g14386Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_40132500Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00062771Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00074174Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIV_pilon.g10272Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIV_pilon.g11237Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIV_pilon.g11849Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIV_pilon.g12297Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00090687Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00091743Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00093701Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096560Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099719Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00100817Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102108Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103631Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103632Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103633Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103634Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109266Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111711Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111712Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00112676Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113077Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115352Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115482Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116554Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118939Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00203289Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272500Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276609Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279013Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279246Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280003Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280791Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280865Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00282135Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304958Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable several functions, including GTPase activity; heme binding activity; and ion binding activity. Is an ortholog of C. elegans arf-5. In C. elegans, arf-5 is involved in embryo development and germ cell development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA11731
Corresponding_transcriptPPA11731.1
Other_sequenceOden_isotig14089
CBC01614_1
EH005420.1
EX546338.1
OOC00683_1
CJC06246_1
MA01641
Tcir_isotig13013
HG02135
Hbac_isotig01223
TSC11309_1
GR978781.1
EX911619.1
FE913065.1
EX544100.1
JI171814.1
JI226664.1
PPC04246_1
Hbac_isotig02940
DA00212
EX555158.1
ES412527.1
FC815909.1
Dviv_isotig11427
OVC09244_1
DAC02600_1
XI02657
ES562646.1
Dviv_isotig21897
EX915575.1
CRC01949_1
FG978260.1
Acan_isotig08151
JO474480.1
FK806991.1
PP00184
HG11251
BUC01883_1
ES569704.1
JI216434.1
MJC03372_1
FE915818.1
PPC11236_1
PP00340
JI216431.1
EX559864.1
CBC00625_1
EE724177.1
SRC00757_1
Acan_isotig13284
CBC01818_1
GR977228.1
AYC04583_1
MJ03296
ES561857.1
ES563577.1
Dviv_isotig19216
CRC00087_1
ACC02888_1
ES570039.1
MH00509
FD515644.1
CRC00355_1
TM03170
GR978142.1
TSC01779_1
FC820128.1
FK807413.1
MI05019
BU586682.1
ASC21422_1
EX540563.1
PPC03886_1
JI253140.1
FE909108.1
JI216469.1
FG581626.1
ASC00506_1
FC815353.1
FE916372.1
AE02901
FK804622.1
JI481861.1
AE02136
ES569716.1
AE02266
GR978020.1
DA04536
PTC00389_1
GR979277.1
NBC06071_1
BXC02031_1
RS06334
JI226618.1
TMC03926_1
JO469038.1
RSC01919_1
JI226652.1
EX915406.1
SC00583
HGC09514_1
MIC04924_1
JI459847.1
EX010332.1
EX014897.1
GW411926.1
HGC02036_1
ES739612.1
PP00435
EX545217.1
Acan_isotig10217
EX499950.1
MJ01425
FE915417.1
Hbac_isotig05102
ASC10095_1
AIC00075_1
CJC16174_1
Oden_isotig20570
EH005245.1
HG11410
AS16803
DQ471885.1
TS02826
JI477880.1
HG03936
NB06894
GW410399.1
PPC02511_1
ES744122.1
CSC00957_1
SR01548
CGC00605_1
ES564292.1
CJC03778_1
SRC03666_1
SS03467
AE02815
EW742443.1
FF680017.1
HC09851
MHC01897_1
CR02570
XI02658
JI226626.1
Tcir_isotig17872
Tcol_isotig09641
XI05430
JI219558.1
JI216450.1
ES744129.1
EX502954.1
SR00833
JI217157.1
FG587808.1
CR07279
CBC09872_1
ASC10139_1
PPC02879_1
JI226632.1
FE911318.1
SSC00444_1
Dviv_isotig11425
FC818766.1
CGC00650_1
EX555011.1
RS08140
PT00072
FD514794.1
CJC00532_1
BMC05121_1
MJC00020_1
GR977727.1
ES565033.1
SS00622
CJC06373_1
AYC01028_1
Tcol_isotig09642
HCC09526_1
GR977868.1
JI175971.1
PPC01880_1
FK802561.1
ACC07456_1
JO471538.1
FC818485.1
JI226659.1
TSC07337_1
AS12253
Dviv_isotig11424
Oden_isotig19746
FC812798.1
ES412541.1
ASC32861_1
JI460795.1
BUC02241_1
HBC00239_1
AE04674
EX566112.1
RSC03653_1
FK809504.1
ASC09646_1
XI01449
DAC00079_1
JI211666.1
CR03967
GO250823.1
XIC04001_1
PPC15050_1
FC810489.1
Oden_isotig14088
CR01647
XIC03335_1
JO474867.1
BG310560.1
SRC00308_1
BMC02431_1
HBC08489_1
MAC00946_1
FG620134.1
TX00214
Tcir_isotig20228
Dviv_isotig21898
FC813048.1
PSC02038_1
Tcir_isotig07309
JI226607.1
ES561326.1
JI480943.1
EX011957.1
SC00173
FC815742.1
FE918937.1
CR02588
XIC03337_1
EX007875.1
ES740322.1
FC814848.1
SC00772
AS03101
GR16501
XIC00148_1
Tcol_isotig18706
TCC00400_1
ES562880.1
EX915097.1
AS13821
JI176173.1
EW742500.1
Dviv_isotig11426
ALC00803_1
Name_isotig04684
SSC02469_1
FC548767.1
Experimental_infoMicroarray_resultsGPL14372_Probes_38040
GPL14372_Probes_38041
GPL14372_Probes_38042
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_X.nematophila_regulated
MethodGene