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WormBase Tree Display for Gene: WBGene00097594

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Name Class

WBGene00097594SMapS_parentSequencePPA_ChrI
IdentityVersion5
NameCGC_namePpa-unc-112From_analysisInferred_from_orthology
Sequence_namePPA08040
Molecular_namePPA08040
PPA08040.1
PP75439
Other_nameGENEPREDICTION_SNAP300000064525
UMM-S278-11.3Person_evidenceWBPerson606
Public_namePpa-unc-112
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
208 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
308 May 2019 10:09:22WBPerson1983Name_changeCGC_namePpa-unc-112
428 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
528 Jul 2021 11:12:27WBPerson1983Name_changeCGC_namePpa-unc-112
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000324.52254From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010121.3641From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
4.52254From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
8.62888From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00176983
OrthologWBGene00158651Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00027203Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223076Brugia malayiFrom_analysisWormBase-Compara
WBGene00006836Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00135987Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00243942Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g1990Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10368Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g1173Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7370Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17736Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g18666Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15624Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2031Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g14026Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g23708Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g7480Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g23667Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00125.g5037Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_04890.g19193Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_12012.g23526Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-112Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15915Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00361.g10114Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02618.g27253Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_11922Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_017456Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00267Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g23283Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50349400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00064391Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrV_pilon.g16592Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00257862Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00295078Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in integrin-mediated signaling pathway. Is an ortholog of C. elegans unc-112. In C. elegans, unc-112 is involved in several processes, including muscle cell cellular homeostasis; positive regulation of supramolecular fiber organization; and regulation of engulfment of apoptotic cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA08040
Corresponding_CDS_historyPPA08040:pp270
Corresponding_transcriptPPA08040.1
Other_sequencePPC00189_1
HSC01427_1
SSC00560_1
GO240477.1
JI168192.1
FC547602.1
GRC01190_1
GE625592.1
FC540415.1
HSC00120_2
HS00394
Dviv_isotig17398
PP00302
Dviv_isotig27248
Name_isotig01475
HG06612
ES566133.1
CJC03668_1
CR01259
MC02818
EX557757.1
HG00162
HBC12983_1
TCC00624_1
BXC04442_1
GP03063
AE03393
HSC00120_1
HGC10375_1
SS01809
TX01140
HGC03745_1
MCC02496_1
EX008876.1
HS00278
CRC02526_1
HBC20401_1
PTC04724_1
Dviv_isotig29289
Tcol_isotig10459
HSC00781_1
HBC02730_1
ACC12187_1
HC05762
Hbac_isotig02542
EX557748.1
GO239234.1
EX542526.1
CR05312
GR12330
PT00156
EX564760.1
SS00610
AYC03133_1
HG01235
HS00389
GPC02282_1
EX500193.1
HGC06699_1
EX559344.1
HS01334
HSC00534_1
CRC05378_1
FF679192.1
EX557108.1
HSC00881_1
HGC12210_1
Oden_isotig25626
Oden_isotig18734
EX013235.1
SSC04146_1
HS01302
EX911296.1
EX008953.1
HCC07634_1
TSC12039_1
Acan_isotig07556
Dviv_isotig17399
FF678244.1
HS00311
EX555434.1
HG00669
HG05306
Experimental_infoMicroarray_resultsGPL14372_Probes_4058
GPL14372_Probes_43046
GPL14372_Probes_43047
GPL14372_Probes_43048
GPL14372_Probes_43049
GPL14372_Probes_43050
Remark[190208 pad] The CGC name Ppa-unc-112 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-unc-112 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene