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WormBase Tree Display for Gene: WBGene00079849

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Name Class

WBGene00079849SMapS_parentSequenceCrem_Contig16
IdentityVersion1
NameSequence_nameCRE08182
Molecular_nameCRE08182
CRE08182.1
RP41128
Public_nameCRE08182
SpeciesCaenorhabditis remanei
HistoryVersion_change103 Jul 2008 11:46:53WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000042.02024From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
2.22937From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
2.43851From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002719.847From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
21.9377From_analysisRNASeq.remanei.WBls:0000027.control_mean
23.819From_analysisRNASeq.remanei.WBls:0000027.control_median
27.791From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
30.6868From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
9.426From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003812.5471From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
4.64992From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
8.01625From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
8.40442From_analysisRNASeq.remanei.WBls:0000038.control_mean
WBls:000004111.7334From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
18.8323From_analysisRNASeq.remanei.WBls:0000041.control_median
20.9955From_analysisRNASeq.remanei.WBls:0000041.control_mean
25.9312From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
34.485From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
35.5081From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
8.51845From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
9.797From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:000010112.4812From_analysisRNASeq.remanei.total_over_all_stages.control_median
15.6559From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00170083
00170084
00170085
Ortholog (40)
ParalogWBGene00051618Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00054992Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00065448Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00053946Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00055470Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00057397Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00065671Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00067090Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00073358Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00073420Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable protein tyrosine/serine/threonine phosphatase activity. Predicted to be involved in dephosphorylation. Is an ortholog of C. elegans C04F12.8.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE08182
Corresponding_transcriptCRE08182.1
Other_sequence (22)
Experimental_infoExpr_patternExpr1095243
Microarray_resultsGPL14146_CRE08182_763-822_0.949_1_A
MethodGene