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WormBase Tree Display for Gene: WBGene00058393

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Name Class

WBGene00058393SMapS_parentSequenceCrem_Contig15
IdentityVersion3
NameCGC_nameCre-suca-1From_analysisInferred_from_orthology
Sequence_nameCRE07436
Molecular_nameCRE07436
CRE07436.1
RP40058
Other_namecr01.sctg11.wum.229
Public_nameCre-suca-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:45:18WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE07436
Other_namecr01.sctg11.wum.229
308 Dec 2011 12:03:58WBPerson2970Name_changeCGC_nameCre-suca-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsuca
RNASeq_FPKMWBls:000000497.2564From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
97.5836From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
97.9109From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024102.676From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
103.31From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
104.051From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
108.279From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
116.507From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
117.017From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
29.2438From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
29.4015From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
30.1252From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
30.4466From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
36.0495From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
41.7092From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
43.2788From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
44.1338From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
47.3178From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
48.7347From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
50.5218From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
50.6193From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
50.8391From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
51.3681From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
51.4852From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
53.4195From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
53.5183From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
53.889From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
56.7386From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
58.6567From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
59.0279From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
60.5104From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
61.2476From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
61.599From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
62.7915From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
62.7934From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
63.0556From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
66.9556From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
67.4636From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
70.3821From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
71.7836From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
72.4254From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
72.8579From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
74.14From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
76.1441From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
76.6019From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
77.2138From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
77.298From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
77.7608From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
78.2861From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
81.7467From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
83.9293From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
88.4636From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
89.4113From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
97.5956From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
99.1831From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
99.7989From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
WBls:0000027150.95From_analysisRNASeq.remanei.WBls:0000027.control_mean
172.991From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
176.993From_analysisRNASeq.remanei.WBls:0000027.control_median
180.995From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
181.469From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
68.3437From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:0000038104.888From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
145.351From_analysisRNASeq.remanei.WBls:0000038.control_mean
163.841From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
167.323From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:0000041101.084From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
103.251From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
110.562From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
78.0517From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
86.9186From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
89.6826From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
94.925From_analysisRNASeq.remanei.WBls:0000041.control_mean
95.3833From_analysisRNASeq.remanei.WBls:0000041.control_median
WBls:0000063109.272From_analysisRNASeq.remanei.WBls:0000063.control_mean
110.159From_analysisRNASeq.remanei.WBls:0000063.control_median
123.02From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
127.516From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
127.971From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
142.615From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
146.477From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
74.1606From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
83.3484From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
85.0707From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
85.2464From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
97.298From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
WBls:0000101102.168From_analysisRNASeq.remanei.total_over_all_stages.control_median
111.434From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00153811
00153812
00153813
OrthologWBGene00009812Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00037153Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00159345Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00130121Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00224438Brugia malayiFrom_analysisWormBase-Compara
WBGene00238788Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g2994Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g13330Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14394Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14423Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15938Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25222Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2110Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g13775Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g2752Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19924Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00795.g14182Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-suca-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13828Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00025.g1489Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01238Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023665Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01502Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g21059Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0078100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19968Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00255937Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00262856Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00298309Trichuris murisFrom_analysisWormBase-Compara
WBGene00301111Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00067817Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00083799Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and catalytic activity. Predicted to be involved in tricarboxylic acid cycle. Is an ortholog of C. elegans suca-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE07436
Corresponding_transcriptCRE07436.1
Other_sequenceEW741732.1
CBC05889_1
AYC02033_1
HCC03386_1
CBC00292_1
BXC01821_1
EX911976.1
EY467728.1
SS00765
AAC00737_1
EY470527.1
FC817875.1
JI466243.1
GO249101.1
GO250335.1
ACC03069_1
EY467217.1
PPC12242_1
FC810654.1
Hbac_isotig01306
Acan_isotig10655
PTC03014_1
SRC01805_1
Acan_isotig05913
ES744616.1
Dviv_isotig22504
BXC06948_1
CR05703
FC816089.1
SS00494
SR00681
CRC00264_1
DN190919.1
HC00014
Name_isotig01732
ACC22135_1
Acan_isotig05912
EX552199.1
CJC03792_1
BUC00101_1
CBC05806_1
PT03011
NB11675
GR19092
EY472582.1
Oden_isotig19089
BXC04910_1
Tcol_isotig07163
ACC07956_1
HS00456
GRC03453_1
EX914740.1
EY467200.1
HSC00095_1
Dviv_isotig34423
FC543925.1
GU971368.1
CJC17285_1
FC555292.1
TSC01338_1
EY461597.1
FC550050.1
EX552331.1
ES412342.1
SSC03050_1
MCC03408_1
HS00066
Tcol_isotig07164
HG02953
ACC07302_1
JI257366.1
TMC00912_1
HBC14770_1
EY462563.1
FK806983.1
AE04185
EY466088.1
MC01881
JI173905.1
HGC03466_1
EX007636.1
FC812253.1
HC00303
AE00132
BUC02075_1
SSC02679_1
FK809503.1
NBC04461_1
FC543993.1
EW741128.1
PPC11697_1
ES564853.1
TM01301
AE00125
Experimental_infoExpr_patternExpr1107796
Microarray_resultsGPL14146_CRE07436_456-515_0.856_26_C
GPL14146_CRE07436_489-548_0.869_18_B
GPL14146_CRE07436_622-681_0.840_30_A
MethodGene