WormBase Tree Display for Gene: WBGene00009812
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| WBGene00009812 | SMap | S_parent | Sequence | F47B10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | suca-1 | Person_evidence | WBPerson1983 | |||||
| WBPerson261 | |||||||||
| Sequence_name | F47B10.1 | ||||||||
| Molecular_name | F47B10.1 | ||||||||
| F47B10.1.1 | |||||||||
| CE03351 | |||||||||
| Other_name | CELE_F47B10.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | suca-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Dec 2011 12:14:43 | WBPerson2970 | Name_change | CGC_name | suca-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | suca | ||||||||
| Allele (33) | |||||||||
| Strain | WBStrain00051214 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (24) | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00016844 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable succinate-CoA ligase (ADP-forming) activity. Predicted to be involved in succinyl-CoA metabolic process and tricarboxylic acid cycle. Located in mitochondrion. Expressed in anterior gonad arm. Human ortholog(s) of this gene implicated in mitochondrial DNA depletion syndrome 5. Is an ortholog of human SUCLA2 (succinate-CoA ligase ADP-forming subunit beta). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080124 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11448) | ||||
| Molecular_info | Corresponding_CDS | F47B10.1 | |||||||
| Corresponding_transcript | F47B10.1.1 | ||||||||
| Other_sequence (91) | |||||||||
| Associated_feature | WBsf1006844 | ||||||||
| WBsf1006845 | |||||||||
| WBsf1023778 | |||||||||
| WBsf1023779 | |||||||||
| WBsf237909 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00106979 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015145 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00066657 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047594 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13131 | ||||||||
| Expr1013311 | |||||||||
| Expr1034287 | |||||||||
| Expr1151430 | |||||||||
| Expr2017100 | |||||||||
| Expr2035236 | |||||||||
| Drives_construct | WBCnstr00031900 | ||||||||
| Construct_product | WBCnstr00031900 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (179) | |||||||||
| Interaction (160) | |||||||||
| Map_info | Map | X | Position | 2.68095 | |||||
| Positive | Positive_clone | F47B10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041022 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00065625 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
