WormBase Tree Display for Gene: WBGene00045289
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| WBGene00045289 | SMap | S_parent | Sequence | C31C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | fbxa-169 | Person_evidence | WBPerson655 | |||||
| Sequence_name | C31C9.8 | ||||||||
| Molecular_name | C31C9.8 | ||||||||
| C31C9.8.1 | |||||||||
| CE53882 | |||||||||
| C31C9.8.2 | |||||||||
| Other_name | CELE_C31C9.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxa-169 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00045289 | |||||
| NDB | locus_tag | CELE_C31C9.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00045289|UniProtKB=A3RMU2 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 6418621 | |||||||
| RefSeq | protein | NM_001377892.2 | |||||||
| TREEFAM | TREEFAM_ID | TF321294 | |||||||
| TrEMBL | UniProtAcc | A3RMU2 | |||||||
| UniProt_GCRP | UniProtAcc | A3RMU2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 Feb 2007 14:56:47 | WBPerson1983 | Event | Split_from | WBGene00007838 | ||
| 2 | 01 Mar 2007 11:55:18 | WBPerson2970 | Name_change | CGC_name | fbxa-169 | ||||
| 3 | 21 Oct 2019 15:07:28 | WBPerson4025 | Event | Split_into | WBGene00305095 | ||||
| Split_from | WBGene00007838 | ||||||||
| Split_into | WBGene00305095 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (205) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog (222) | |||||||||
| Structured_description | Automated_description | Enriched in ABplapaaap; ABprapaaap; G2; W cell; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; eat-2; and mex-3 based on RNA-seq studies. Is affected by six chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq studies. Is predicted to encode a protein with the following domains: Mos1 transposase, HTH domain; FTH domain; HTH domain in Mos1 transposase; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C31C9.8 | |||||||
| Corresponding_CDS_history | C31C9.8:wp274 | ||||||||
| Corresponding_transcript | C31C9.8.1 | ||||||||
| C31C9.8.2 | |||||||||
| Other_sequence | CBC11757_1 | ||||||||
| HGC01528_1 | |||||||||
| MH04744 | |||||||||
| CR12653 | |||||||||
| CRC09804_1 | |||||||||
| HG01132 | |||||||||
| Associated_feature | WBsf990481 | ||||||||
| WBsf990482 | |||||||||
| WBsf1013676 | |||||||||
| WBsf1013677 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011434 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041606 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021403 | ||||||||
| Expr1040361 | |||||||||
| Expr1145634 | |||||||||
| Expr2011494 | |||||||||
| Expr2029731 | |||||||||
| Drives_construct | WBCnstr00023272 | ||||||||
| Construct_product | WBCnstr00023272 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (51) | |||||||||
| Map_info | Map | II | Position | 19.3748 | Error | 0.098891 | |||
| Positive | Positive_clone | C31C9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
