WormBase Tree Display for Gene: WBGene00007838

WBGene00007838 SMap: S_parent: Sequence: C31C9
  Identity: Version: 4
    Name: CGC_name: fbxa-168 Person_evidence: WBPerson655
      Sequence_name: C31C9.4
      Molecular_name: C31C9.4
      Other_name: CELE_C31C9.4 Accession_evidence: NDB BX284602
      Public_name: fbxa-168
    DB_info: Database: AceView gene 2N941
        WormQTL gene WBGene00007838
        WormFlux gene WBGene00007838
        NDB locus_tag CELE_C31C9.4
        NCBI gene 183083
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 26 Feb 2007 14:56:47 WBPerson1983 Event: Split_into: WBGene00045289
        3 01 Mar 2007 11:55:18 WBPerson2970 Name_change: CGC_name: fbxa-168
        4 31 Aug 2016 11:50:35 WBPerson1983 Event: Changed_class: CDS Pseudogene
      Split_into: WBGene00045289
    Status: Live
  Gene_info: Biotype: SO:0000336
    Gene_class: fbxa
    Allele (86)
    RNASeq_FPKM (74)
    Ortholog: WBGene00141368 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00147532 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00195162 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00038016 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00038015 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00037964 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00036023 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00042195 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00037963 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00136101 Caenorhabditis japonica From_analysis: Inparanoid_8
    Paralog (30)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in PLM; Z1; and Z4 based on RNA-seq studies. Is affected by several genes including daf-16; daf-12; and eat-2 based on microarray and RNA-seq studies. Is affected by six chemicals including allantoin; Sirolimus; and Rifampin based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history: C31C9.4:wp130
      C31C9.4:wp172
      C31C9.4:wp255
    Corresponding_pseudogene: C31C9.4
    Other_sequence: CR05737
      CBC16046_1
      CRC05273_1
    Associated_feature: WBsf990480
  Experimental_info: Expr_pattern: Expr1014717
      Expr1033398
      Expr1145631
    Drives_construct: WBCnstr00033444
    Construct_product: WBCnstr00033444
    Microarray_results (11)
    Expression_cluster (44)
  Map_info: Map: II Position: 19.1673 Error: 0.084858
    Positive: Positive_clone: C31C9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene