WormBase Tree Display for Gene: WBGene00042195

WBGene00042195 SMap: S_parent: Sequence: cb25.NA_073
  Identity: Version: 3
    Name: Sequence_name: CBG23976
      Molecular_name: CBG23976
        CBG23976.1
        CBP12680
      Other_name: CBG_23976 Accession_evidence: NDB HE601375
      Public_name: CBG23976
    DB_info: Database: NDB locus_tag CBG_23976
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:12 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Cbr-fbxa-153
        3 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Removed
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000002 0.723578 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.921571 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.930365 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        1.11077 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        1.02057 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        1.07282 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.52655 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 23.0896 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        25.7448 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        28.4 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        23.8441 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        25.1112 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 17.3214 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        19.4152 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        21.509 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        16.7766 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        19.2119 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        19.5852 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        20.8674 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (11)
      WBls:0000027 0.085311 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.255932 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.021616 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.043232 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        0.074791 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 0 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.022208 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.088834 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        0 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
            RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
            RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 0.339178 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        2.57972 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        2.81487 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        3.02414 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        3.2334 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        3.93141 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.785244 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        1.1543 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        1.98459 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        2.04307 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 0.310778 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0.382603 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.41788 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0.507838 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.676521 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0.462859 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.511266 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.15458 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.339178 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        3.68703 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.70005 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        5.07003 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (52)
    Paralog (93)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: F-box A protein FB155/FB224; Mos1 transposase, HTH domain; FTH domain; HTH domain in Mos1 transposase; F-box domain; and Domain of unknown function DUF38, Caenorhabditis species. Is an ortholog of C. elegans fbxa-153 and fbxa-210. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG23976
    Corresponding_CDS_history: CBG23976:bp194
    Corresponding_transcript: CBG23976.1
    Other_sequence: CBC07959_1
  Experimental_info: Expr_pattern: Expr1063024
    Microarray_results: GPL8303_CB6_WBGene00042195_A
      GPL14143_CBG23976_97-156_0.882_16_A
  Remark: [200603 pad] The CGC name Cbr-fbxa-153 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene