WormBase Tree Display for Gene: WBGene00044711
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WBGene00044711 | SMap | S_parent | Sequence | C17H1 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | pals-10 | Person_evidence | WBPerson260 | |||
Sequence_name | C17H1.11 | ||||||
Molecular_name | C17H1.11 | ||||||
WP:CE47552 | |||||||
CE47552 | |||||||
C17H1.11.1 | |||||||
Other_name | CELE_C17H1.11 | Accession_evidence | NDB | BX284601 | |||
Public_name | pals-10 | ||||||
DB_info | Database | NDB | locus_tag | CELE_C17H1.11 | |||
NCBI | gene | 13182677 | |||||
RefSeq | mRNA | NM_001276636.1 | |||||
protein | NP_001263565.1 | ||||||
NM_001276636.4 | |||||||
UniProt | UniProtAcc | I2FLU3 | |||||
TrEMBL | UniProtAcc | I2FLU3 | |||||
UniProt_GCRP | UniProtAcc | I2FLU3 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (3) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pals | ||||||
Allele (24) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | Sp34_50055100 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | |||
Paralog | WBGene00007662 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||
WormBase-Compara | |||||||
WBGene00007656 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00007658 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00009061 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00013294 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00016281 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00044237 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Is affected by several genes including skn-1; elt-2; and lin-35 based on microarray and RNA-seq studies. Is affected by seven chemicals including Rifampin; Psoralens; and Sirolimus based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed (2) | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C17H1.11 | |||||
Corresponding_transcript | C17H1.11.1 | ||||||
Corresponding_pseudogene_history | C17H1.11:wp231 | ||||||
Experimental_info | Microarray_results | A_12_P151340 | |||||
A_12_P151341 | |||||||
A_12_P151342 | |||||||
A_12_P151343 | |||||||
A_12_P151344 | |||||||
GPL19516_CGZ0005167 | |||||||
GPL21109_C17H1.11 | |||||||
Expression_cluster (43) | |||||||
Map_info | Map | I | Position | 17.2192 | |||
Positive | Positive_clone | C17H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |