WormBase Tree Display for Gene: WBGene00044271
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WBGene00044271 | SMap | S_parent | Sequence | H12D21 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nspa-2 | Person_evidence | WBPerson1983 | |||||
Sequence_name | H12D21.12 | ||||||||
Molecular_name | H12D21.12 | ||||||||
H12D21.12.1 | |||||||||
CE15223 | |||||||||
Other_name | CELE_H12D21.12 | Accession_evidence | NDB | BX284605 | |||||
Public_name | nspa-2 | ||||||||
DB_info | Database | WormFlux | gene | WBGene00044271 | |||||
NDB | locus_tag | CELE_H12D21.12 | |||||||
NCBI | gene | 3565045 | |||||||
RefSeq | protein | NM_001028836.3 | |||||||
TrEMBL | UniProtAcc | G5EDJ8 | |||||||
UniProt_GCRP | UniProtAcc | G5EDJ8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 22 Mar 2005 15:20:40 | WBPerson1983 | Event | Created | |||
2 | 01 Apr 2005 11:59:21 | WBPerson2970 | Name_change | CGC_name | nspa-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nspa | ||||||||
Allele (21) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00027402 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
WBGene00037775 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
WBGene00158592 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
WBGene00270986 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||||||
CSP26.g5930 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
FL83_10514 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_005198 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
GCK72_005232 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
WBGene00078007 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
Paralog | WBGene00010377 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00012294 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00013887 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00013888 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00044272 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in neurons based on microarray studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on RNA-seq and microarray studies. Is affected by thirteen chemicals including hydrogen sulfide; multi-walled carbon nanotube; and Tunicamycin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | H12D21.12 | |||||||
Corresponding_transcript | H12D21.12.1 | ||||||||
Other_sequence | FD514598.1 | ||||||||
CSC02319_1 | |||||||||
Associated_feature | WBsf1002177 | ||||||||
WBsf1020943 | |||||||||
Experimental_info | RNAi_result | WBRNAi00058904 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00042264 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021689 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00054861 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00016241 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1153102 | ||||||||
Drives_construct | WBCnstr00023667 | ||||||||
Construct_product | WBCnstr00023667 | ||||||||
Microarray_results | 172431_x_at | ||||||||
GPL19516_CGZ0026165 | |||||||||
GPL21109_H12D21.12 | |||||||||
GPL8304_CE_WBGene00044271_A | |||||||||
GPL8673_H12D21_12P00046 | |||||||||
Expression_cluster (73) | |||||||||
Map_info | Map | V | Position | 6.99935 | |||||
Positive | Positive_clone | H12D21 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |