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WormBase Tree Display for Gene: WBGene00042600

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Name Class

WBGene00042600SMapS_parentSequencecb25.NA_172
IdentityVersion2
NameSequence_nameCBG24505
Molecular_nameCBG24505
CBG24505.1
CBP39796
Other_nameCBG_24505Accession_evidenceNDBHE601288
Public_nameCBG24505
DB_infoDatabaseNDBlocus_tagCBG_24505
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
224 Jul 2008 11:56:39WBPerson1847EventAcquires_mergeWBGene00042598
Acquires_mergeWBGene00042598
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000214.8968From_analysisRNASeq.briggsae.WBls:0000002.control_mean
15.3155From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
24.0307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.34411From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
15.1898From_analysisRNASeq.briggsae.WBls:0000002.control_mean
15.6923From_analysisRNASeq.briggsae.WBls:0000002.control_median
16.0691From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000320.0548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
37.6515From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
55.2482From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
41.6538From_analysisRNASeq.briggsae.WBls:0000003.control_mean
49.6583From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000412.867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
14.0203From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
15.1735From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
15.665From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
16.3966From_analysisRNASeq.briggsae.WBls:0000004.control_mean
17.4287From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
20.8486From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002717.771From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.94193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
7.4089From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
9.37394From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.62383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
7.01637From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.68641From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003511.1582From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.5968From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
11.9247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
7.10179From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
8.31527From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.45603From_analysisRNASeq.briggsae.WBls:0000038.control_median
9.48464From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004111.6406From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
37.5088From_analysisRNASeq.briggsae.WBls:0000041.control_mean
43.8883From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
45.3589From_analysisRNASeq.briggsae.WBls:0000041.control_median
46.8295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
47.6766From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
12.3787From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
28.1335From_analysisRNASeq.briggsae.WBls:0000041.control_median
28.1718From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.6169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006319.487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
19.5738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
24.0508From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
24.3542From_analysisRNASeq.briggsae.WBls:0000063.control_mean
28.0649From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
30.5947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
13.037From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
21.8123From_analysisRNASeq.briggsae.WBls:0000063.control_median
22.468From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010112.867From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.862From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
14.1053From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.798From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00145623
00145624
00145625
00145626
Ortholog (16)
ParalogWBGene00023874Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025084Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029634Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030001Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030002Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030162Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030970Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034888Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036076Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041902Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ABC-type transporter activity and ATP binding activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans C06G4.4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG24505
Corresponding_CDS_historyCBG24505:bp194
CBG24505:bp255
Corresponding_transcriptCBG24505.1
Other_sequenceJI167542.1
JI177347.1
Experimental_infoExpr_patternExpr1053329
Microarray_resultsGPL8303_CB6_WBGene00042598_A
GPL14143_CBG24505_1368-1427_0.887_9_C
GPL14143_CBG24505_1379-1438_0.889_7_A
GPL14143_CBG24505_1390-1449_0.889_8_B
MethodGene