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WormBase Tree Display for Gene: WBGene00041799

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Name Class

WBGene00041799SMapS_parentSequencecb25.fpc4470
IdentityVersion1
NameSequence_nameCBG23439
Molecular_nameCBG23439
CBG23439.1
CBP31168
Other_nameCBG_23439Accession_evidenceNDBHE601533
Public_nameCBG23439
DB_infoDatabaseNDBlocus_tagCBG_23439
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000024.96789From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.40808From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.84876From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
7.40759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
4.83422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.90833From_analysisRNASeq.briggsae.WBls:0000002.control_median
6.01462From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000310.1766From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
5.72489From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
7.95075From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
8.26109From_analysisRNASeq.briggsae.WBls:0000003.control_mean
8.88178From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000049.35103From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
9.65178From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
9.95254From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
10.1158From_analysisRNASeq.briggsae.WBls:0000004.control_mean
14.696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
7.49166From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
9.08776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:00000240.928537From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
12.3654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
13.4375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
13.7509From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
2.84772From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
3.98559From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
5.0238From_analysisRNASeq.briggsae.WBls:0000024.control_median
6.06201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
6.31518From_analysisRNASeq.briggsae.WBls:0000024.control_mean
1.60847From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
3.18683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
4.34593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
WBls:00000271.06888From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.06277From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.73046From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.38898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
11.5452From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
4.05972From_analysisRNASeq.briggsae.WBls:0000027.control_median
5.18338From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003510.9555From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.4423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
18.1481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.08553From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
5.1263From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
8.2843From_analysisRNASeq.briggsae.WBls:0000038.control_median
9.45056From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000411.06347From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
12.2084From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.75671From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.89579From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.03488From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
4.26586From_analysisRNASeq.briggsae.WBls:0000041.control_mean
11.9676From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
4.28351From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.9272From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.53215From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.48968From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.74539From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.03042From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.20684From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.092665From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.791172From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.46993From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001014.96789From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.6354From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.46587From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.27778From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00145085
00145086
00145087
00145088
OrthologWBGene00140466Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00142571Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157068Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190484Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191890Caenorhabditis brenneriFrom_analysisWormBase-Compara
CBOVI.g4979Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g13608Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g14148Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g14598Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g14605Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g14617Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g18810Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g21470Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g2173Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g2179Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g9292Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11976Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g13133Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g2031Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g2034Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g6956Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP31.g10203Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g13602Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g7066Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g7193Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g7233Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g8476Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g18224Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g10483Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_22693.g26900Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g13781Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14830Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15388Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21158Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21184Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00060.g2916Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00923.g16799Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01864.g23579Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03328.g29828Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_08077.g38404Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_13163.g40807Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_000587Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_000667Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_013916Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_013950Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g14932Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_30253800Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40065600Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50115300Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50366400Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50371100Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00001876Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001880Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001883Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001887Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001891Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001899Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001901Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001906Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001914Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001916Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001919Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001923Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001929Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001933Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001937Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00223686Brugia malayiFrom_analysisWormBase-Compara
chrII_pilon.g6424Caenorhabditis elegansFrom_analysisWormBase-Compara
chrII_pilon.g6428Caenorhabditis elegansFrom_analysisWormBase-Compara
chrII_pilon.g6429Caenorhabditis elegansFrom_analysisWormBase-Compara
chrII_pilon.g6433Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIV_pilon.g10847Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIV_pilon.g11045Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIV_pilon.g11830Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIV_pilon.g11834Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIV_pilon.g11850Caenorhabditis elegansFrom_analysisWormBase-Compara
chrV_pilon.g15010Caenorhabditis elegansFrom_analysisWormBase-Compara
chrV_pilon.g15101Caenorhabditis elegansFrom_analysisWormBase-Compara
chrV_pilon.g15106Caenorhabditis elegansFrom_analysisWormBase-Compara
chrV_pilon.g17018Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g19379Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00213572Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00068702Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00068735Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00079888Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00079890Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00080192Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00244700Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00110455Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00286174Trichuris murisFrom_analysisWormBase-Compara
WBGene00286307Trichuris murisFrom_analysisWormBase-Compara
WBGene00298431Trichuris murisFrom_analysisWormBase-Compara
WBGene00299712Trichuris murisFrom_analysisWormBase-Compara
WBGene00299713Trichuris murisFrom_analysisWormBase-Compara
WBGene00300518Trichuris murisFrom_analysisWormBase-Compara
WBGene00300522Trichuris murisFrom_analysisWormBase-Compara
WBGene00300595Trichuris murisFrom_analysisWormBase-Compara
WBGene00302527Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00024726Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024730Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026565Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028214Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028249Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028393Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028396Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031517Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032844Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036684Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038465Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039239Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Is an ortholog of C. elegans his-9; his-6; and his-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23439
Corresponding_CDS_historyCBG23439:bp194
Corresponding_transcriptCBG23439.1
Other_sequenceHGC00101_1
FG352668.1
Dviv_isotig18095
MA02682
HGC11335_1
BMC17905_1
HG02729
FG586929.1
PPC07863_1
Experimental_infoExpr_patternExpr1059899
Microarray_resultsGPL14143_CBG23439_453-512_0.908_3_A
MethodGene