WormBase Tree Display for Gene: WBGene00034958

WBGene00034958 SMap: S_parent: Sequence: cb25.fpc3857a
  Identity: Version: 3
    Name: CGC_name: Cbr-spr-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBG14482
      Molecular_name: CBG14482
        CBG14482.1
        CBP49366
      Other_name: CBG_14482 Accession_evidence: NDB HE600983
      Public_name: Cbr-spr-3
    DB_info: Database: NDB locus_tag CBG_14482
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:04 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 15 Oct 2007 15:19:45 WBPerson2970 Name_change: CGC_name: Cbr-spr-3
        3 18 Jul 2018 16:31:50 WBPerson4025 Event: Split_into: WBGene00303417
      Split_into: WBGene00303417
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: spr
    Allele (15)
    RNASeq_FPKM: WBls:0000002 2.94 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        3.38415 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        3.56043 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        3.65201 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        3.60622 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        3.62853 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        4.36168 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 15.5495 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        17.891 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        20.2325 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        19.4663 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        22.6169 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 22.2575 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        22.3661 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        22.4747 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        22.1663 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        23.0071 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        23.6798 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        28.4932 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 10.881 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        1.34121 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        3.96427 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        5.39549 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        4.2749 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        4.58553 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        5.193 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 5.46381 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 2.04841 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        2.98928 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        3.08641 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        3.31641 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        3.64353 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        3.6644 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 4.89485 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        6.52321 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        6.84241 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        6.97893 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        7.11546 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        7.24011 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        3.72255 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        5.56796 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        5.89722 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        6.20518 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
      WBls:0000063 1.79601 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        2.07468 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        2.08714 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        2.09544 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        2.72278 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        1.85109 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        2.09129 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        2.12648 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 3.96427 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        6.28894 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        4.68914 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        7.86913 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog: WBGene00005008 Caenorhabditis elegans From_analysis: OrthoMCL
            Inparanoid_8
      WBGene00051823 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00068449 Caenorhabditis remanei From_analysis: OMA
      WBGene00157651 Caenorhabditis brenneri From_analysis: Inparanoid_8
      Cnig_chr_X.g24123 Caenorhabditis nigoni From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domain: Zinc finger C2H2-type. Is an ortholog of C. elegans spr-3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG14482
    Corresponding_CDS_history: CBG14482:bp194
      CBG14482:bp266
    Corresponding_transcript: CBG14482.1
  Experimental_info: Expr_pattern: Expr1052650
    Microarray_results: GPL8303_CB6_WBGene00034958_A
      GPL8303_CB6_WBGene00034958_B
      GPL14143_CBG14482_4733-4792_0.808_2_C
      GPL14143_CBG14482_5418-5477_0.765_226_A
      GPL14143_CBG14482_6066-6125_0.809_1_B
  Method: Gene