WormBase Tree Display for Gene: WBGene00032357
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| WBGene00032357 | SMap | S_parent | Sequence | cb25.fpc2454a2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | Cbr-tra-2 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | CBG11194 | ||||||||
| Molecular_name | CBG11194a | ||||||||
| CBG11194a.1 | |||||||||
| CBP38209 | |||||||||
| CBG11194b | |||||||||
| CBP41441 | |||||||||
| CBG11194c | |||||||||
| CBP43518 | |||||||||
| CBG11194b.1 | |||||||||
| CBG11194c.1 | |||||||||
| Other_name | CBG_11194 | Accession_evidence | NDB | HE601002 | |||||
| Public_name | Cbr-tra-2 | ||||||||
| Species | Caenorhabditis briggsae | ||||||||
| History | Version_change | 1 | 08 Sep 2004 10:52:01 | WBPerson1971 | Event | Imported | Initial conversion from brigace | ||
| 2 | 20 Sep 2007 17:07:05 | WBPerson2970 | Name_change | CGC_name | Cbr-tra-2 | ||||
| 3 | 13 Nov 2007 14:06:35 | WBPerson2970 | Event | Acquires_merge | WBGene00000360 | ||||
| 4 | 24 Jul 2008 11:56:31 | WBPerson1847 | Event | Acquires_merge | WBGene00032356 | ||||
| Acquires_merge | WBGene00000360 | ||||||||
| WBGene00032356 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tra | ||||||||
| Allele | WBVar00275592 | Paper_evidence | WBPaper00031485 | ||||||
| WBVar00275593 | Paper_evidence | WBPaper00031485 | |||||||
| WBVar00275594 | Paper_evidence | WBPaper00031485 | |||||||
| WBVar00275591 | |||||||||
| WBVar00275589 | |||||||||
| RNASeq_FPKM (10) | |||||||||
| GO_annotation | 00135787 | ||||||||
| 00135788 | |||||||||
| 00135789 | |||||||||
| Ortholog (19) | |||||||||
| Structured_description | Concise_description | Cbr-tra-2 encodes a plasma membrane protein that is orthologous to C. elegans TRA-2; as in C. elegans, loss of Cbr-tra-2 function results in incomplete sexual cell fate transformations of XX hermaphrodites to male fates, including a one-armed gonad containing only sperm, an abnormal male tail with incomplete sensory rays, and lack of male mating behavior. | Paper_evidence | WBPaper00031485 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 09 Apr 2012 00:00:00 | ||||||||
| Automated_description | Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in hermaphrodite germ-line sex determination and hermaphrodite somatic sex determination. Is an ortholog of C. elegans tra-2. In C. elegans, tra-2 is involved in developmental process involved in reproduction and oocyte fate determination. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | CBG11194a | |||||||
| CBG11194b | |||||||||
| CBG11194c | |||||||||
| Corresponding_CDS_history | CBG11194:bp194 | ||||||||
| CBG11194:bp207 | |||||||||
| CBG11194:bp208 | |||||||||
| CBG11194:bp255 | |||||||||
| Corresponding_transcript | CBG11194a.1 | ||||||||
| CBG11194b.1 | |||||||||
| CBG11194c.1 | |||||||||
| Other_sequence | CRC10370_1 | ||||||||
| Oden_isotig17356 | |||||||||
| CR05644 | |||||||||
| Experimental_info | Expr_pattern | Expr1056987 | |||||||
| Microarray_results | GPL8303_CB6_WBGene00032356_A | ||||||||
| GPL8303_CB6_WBGene00032356_B | |||||||||
| GPL14143_CBG11194_2076-2135_0.797_17_B | |||||||||
| GPL14143_CBG11194_5532-5591_0.787_33_A | |||||||||
| GPL14143_CBG11194_5566-5625_0.808_1_C | |||||||||
| Reference | WBPaper00031485 | ||||||||
| WBPaper00034851 | |||||||||
| WBPaper00040437 | |||||||||
| WBPaper00040947 | |||||||||
| WBPaper00044280 | |||||||||
| Method | Gene |
