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WormBase Tree Display for Gene: WBGene00030970

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Name Class

WBGene00030970SMapS_parentSequencecb25.fpc2220a
IdentityVersion2
NameCGC_nameCbr-cft-1From_analysisInferred_from_orthology
Sequence_nameCBG09374
Molecular_nameCBG09374
CBG09374.1
CBP44810
Other_nameCBG_09374Accession_evidenceNDBHE600954
Public_nameCbr-cft-1
DB_infoDatabaseNDBlocus_tagCBG_09374
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-cft-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcft
RNASeq_FPKMWBls:00000022.16058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.80357From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.94449From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.86932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.18274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.48207From_analysisRNASeq.briggsae.WBls:0000002.control_median
2.50405From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.106597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.33694From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.567282From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.447099From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.667418From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.342775From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.485312From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.62785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.429091From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.503621From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.505091From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.622117From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.248556From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.562609From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.95881From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.06527From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.69503From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.42597From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.82745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.28443From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.607495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
10.1783From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.61031From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.79873From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.98715From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
4.09581From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000411.93131From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.97623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.23728From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.24645From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.49833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.57994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.75843From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2.20275From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.22425From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.47227From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.709341From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.83408From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.05643From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.18612From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.21851From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.847058From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.911944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.984187From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001011.97623From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.40579From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.48847From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.18797From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00134404
00134405
00134406
00134407
00134408
Ortholog (36)
ParalogWBGene00023874Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025084Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029634Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030001Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030002Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030162Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034888Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036076Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041902Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042600Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ABC-type transporter activity; ATP binding activity; and ATP hydrolysis activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Expressed in excretory canal. Is an ortholog of C. elegans cft-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09374
Corresponding_CDS_historyCBG09374:bp194
CBG09374:bp255
Corresponding_transcriptCBG09374.1
Experimental_infoExpr_patternExpr4630
Expr1067331
Drives_constructWBCnstr00012134
Microarray_resultsGPL8303_CB6_WBGene00030970_A
GPL8303_CB6_WBGene00030970_B
GPL14143_CBG09374_943-1002_0.793_122_A
MethodGene