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WormBase Tree Display for Gene: WBGene00029996

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Name Class

WBGene00029996SMapS_parentSequencecb25.fpc1402c
IdentityVersion2
NameCGC_nameCbr-unc-96From_analysisInferred_from_orthology
Sequence_nameCBG08140
Molecular_nameCBG08140a
CBG08140a.1
CBP43588
CBG08140b
CBP01944
CBG08140b.1
Other_nameCBG_08140Accession_evidenceNDBHE600971
Public_nameCbr-unc-96
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-96
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
AlleleWBVar00140761
WBVar00140762
WBVar00140763
WBVar00136820
WBVar00136821
RNASeq_FPKMWBls:000000222.4764From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
28.4202From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
28.4741From_analysisRNASeq.briggsae.WBls:0000002.control_mean
34.5257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
12.4768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
24.4748From_analysisRNASeq.briggsae.WBls:0000002.control_mean
25.4483From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.40787From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.37673From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
4.34559From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
2.40197From_analysisRNASeq.briggsae.WBls:0000003.control_mean
2.45245From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000424.1198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
26.5073From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
28.8948From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
24.1224From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
26.8518From_analysisRNASeq.briggsae.WBls:0000004.control_mean
28.03From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
29.092From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:000002428.2608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
39.3319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
48.1161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
49.9928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
57.6357From_analysisRNASeq.briggsae.WBls:0000024.control_median
57.9362From_analysisRNASeq.briggsae.WBls:0000024.control_mean
60.5915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
65.2786From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
68.3573From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
36.241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
47.6368From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
61.9425From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
WBls:00000271.74638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
20.0054From_analysisRNASeq.briggsae.WBls:0000027.control_mean
52.2249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.04492From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
26.6372From_analysisRNASeq.briggsae.WBls:0000027.control_median
26.8114From_analysisRNASeq.briggsae.WBls:0000027.control_mean
47.2295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003528.3183From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003828.8064From_analysisRNASeq.briggsae.WBls:0000038.control_mean
33.0591From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
33.9456From_analysisRNASeq.briggsae.WBls:0000038.control_median
34.8321From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
40.2534From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
7.08091From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004110.0399From_analysisRNASeq.briggsae.WBls:0000041.control_mean
11.0031From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
15.8018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.173From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
8.18153From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
9.59231From_analysisRNASeq.briggsae.WBls:0000041.control_median
11.3661From_analysisRNASeq.briggsae.WBls:0000041.control_mean
12.3111From_analysisRNASeq.briggsae.WBls:0000041.control_median
13.6192From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
14.4183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006310.7846From_analysisRNASeq.briggsae.WBls:0000063.control_mean
11.5572From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
12.7874From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
14.3869From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
15.1916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
11.5394From_analysisRNASeq.briggsae.WBls:0000063.control_mean
13.5871From_analysisRNASeq.briggsae.WBls:0000063.control_median
15.3135From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010115.8018From_analysisRNASeq.briggsae.total_over_all_stages.control_median
23.1923From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
15.5576From_analysisRNASeq.briggsae.total_over_all_stages.control_median
22.614From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
OrthologWBGene00006825Caenorhabditis elegansFrom_analysisHillier-set
OMA
Inparanoid_8
WormBase-Compara
WBGene00060261Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00154193Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00138318Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g2345Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g13902Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g6535Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13418Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g20743Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g6179Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16576Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g18986Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g27743Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g4229Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-unc-96Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15655Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00837.g15927Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_03230Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_022180Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07358Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g5515Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0019300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00223595Brugia malayiFrom_analysisWormBase-Compara
chrX_pilon.g18304Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240682Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00280673Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00268132Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans unc-96. In C. elegans, unc-96 is involved in locomotion; regulation of cytoskeleton organization; and striated muscle myosin thick filament assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG08140a
CBG08140b
Corresponding_CDS_historyCBG08140:bp194
CBG08140:bp255
Corresponding_transcriptCBG08140a.1
CBG08140b.1
Other_sequenceMC00081
BMC13361_1
Dviv_isotig24009
Tcir_isotig11715
BM01009
Tcir_isotig12672
EX553875.1
CR03089
CRC11264_1
Oden_isotig19377
JI175680.1
Acan_isotig09614
JI477321.1
DAC01903_1
CJC07057_1
DA04386
FC540957.1
BM00253
MCC00055_1
ACC25500_1
BMC12925_1
ACC07750_1
Experimental_infoExpr_patternExpr1060547
Microarray_resultsGPL8303_CB6_WBGene00029996_A
GPL8303_CB6_WBGene00029996_B
GPL14143_CBG08140_856-915_0.807_7_C
GPL14143_CBG08140_936-995_0.810_5_B
GPL14143_CBG08140_1045-1104_0.831_1_A
MethodGene