WormBase Tree Display for Variation: WBVar00136821
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WBVar00136821 | Name | Public_name | WBVar00136821 | ||
---|---|---|---|---|---|
Other_name | cbh41347 | ||||
HGVSg | chrX:g.427422A>C | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc1402c | |
Flanking_sequences | ttctgtgacatttatgttttcaggc | aaagtgagtgctgagaaaaaacgcg | |||
Mapping_target | cb25.fpc1402c | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis briggsae | |||
Strain | WBStrain00041078 | ||||
Laboratory | CP | ||||
Person | WBPerson3706 | ||||
WBPerson227 | |||||
WBPerson225 | |||||
Status | Live | ||||
Affects | Gene | WBGene00029996 | |||
Transcript | CBG08140a.1 | VEP_consequence | splice_region_variant,synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | CBG08140a.1:c.369A>C | ||||
HGVSp | CBP43588.1:p.Ala123%3D | ||||
cDNA_position | 381 | ||||
CDS_position | 369 | ||||
Protein_position | 123 | ||||
Exon_number | 5/13 | ||||
Codon_change | gcA/gcC | ||||
Amino_acid_change | A | ||||
CBG08140b.1 | VEP_consequence | splice_region_variant,synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | CBG08140b.1:c.369A>C | ||||
HGVSp | CBP01944.1:p.Ala123%3D | ||||
cDNA_position | 381 | ||||
CDS_position | 369 | ||||
Protein_position | 123 | ||||
Exon_number | 5/14 | ||||
Codon_change | gcA/gcC | ||||
Amino_acid_change | A | ||||
Method | SNP |