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WormBase Tree Display for Gene: WBGene00028829

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Name Class

WBGene00028829SMapS_parentSequencecb25.fpc0156
IdentityVersion4
NameCGC_nameCbr-unc-60From_analysisInferred_from_orthology
Sequence_nameCBG06572
Molecular_nameCBG06572
CBG06572.1
CBP43686
Other_nameCBG_06572Accession_evidenceNDBHE601320
Public_nameCbr-unc-60
DB_infoDatabaseNDBlocus_tagCBG_06572
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-unc-60
324 Jul 2008 11:56:43WBPerson1847EventAcquires_mergeWBGene00028830
406 Mar 2018 14:53:45WBPerson4025EventSplit_intoWBGene00302979
Acquires_mergeWBGene00028830
Split_intoWBGene00302979
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:0000002174.813From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
181.851From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
201.334From_analysisRNASeq.briggsae.WBls:0000002.control_mean
247.337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
123.008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
178.332From_analysisRNASeq.briggsae.WBls:0000002.control_median
181.752From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000314.0705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
24.4982From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
34.9259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
27.9139From_analysisRNASeq.briggsae.WBls:0000003.control_mean
34.7453From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004181.756From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
193.466From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
205.176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
174.238From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
203.149From_analysisRNASeq.briggsae.WBls:0000004.control_mean
209.3From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
245.277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024141.521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
146.843From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
170.112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
177.351From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
202.505From_analysisRNASeq.briggsae.WBls:0000024.control_median
208.922From_analysisRNASeq.briggsae.WBls:0000024.control_mean
227.659From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
260.565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
90.8995From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
136.983From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
159.627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
93.6697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
WBls:0000027130.581From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
150.38From_analysisRNASeq.briggsae.WBls:0000027.control_mean
268.668From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
51.892From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
173.596From_analysisRNASeq.briggsae.WBls:0000027.control_mean
186.913From_analysisRNASeq.briggsae.WBls:0000027.control_median
243.244From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035164.751From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038113.27From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
135.181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
151.165From_analysisRNASeq.briggsae.WBls:0000038.control_median
153.236From_analysisRNASeq.briggsae.WBls:0000038.control_mean
167.149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
197.346From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041180.766From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
56.3516From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
69.8636From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
75.3229From_analysisRNASeq.briggsae.WBls:0000041.control_median
80.7822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
96.9408From_analysisRNASeq.briggsae.WBls:0000041.control_mean
119.103From_analysisRNASeq.briggsae.WBls:0000041.control_median
123.851From_analysisRNASeq.briggsae.WBls:0000041.control_mean
157.423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
197.92From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063108.248From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
68.9832From_analysisRNASeq.briggsae.WBls:0000063.control_mean
71.1705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
74.6306From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
90.8671From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
103.518From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
74.739From_analysisRNASeq.briggsae.WBls:0000063.control_mean
82.7488From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:0000101132.315From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
135.181From_analysisRNASeq.briggsae.total_over_all_stages.control_median
140.153From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
161.087From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00132279
00132280
00132281
Contained_in_operonCBOP0017
OrthologWBGene00006794Caenorhabditis elegansFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00106477Pristionchus pacificusFrom_analysisOMA
WBGene00148085Caenorhabditis brenneriFrom_analysisOMA
WBGene00164160Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00124615Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00053128Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g2271Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4630Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g5966Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g5194Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g18744Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g18773Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g7045Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g12215Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g20995Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g24083Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_V.g18434Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00729.g14897Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_019005Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00216Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g16254Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50046200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00235046Brugia malayiFrom_analysisWormBase-Compara
chrV_pilon.g13231Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00242632Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00264446Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293580Trichuris murisFrom_analysisWormBase-Compara
WBGene00296128Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00302979Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable actin binding activity. Predicted to be involved in actin filament depolymerization. Predicted to be located in actin cytoskeleton. Is an ortholog of C. elegans unc-60. In C. elegans, unc-60 is involved in several processes, including actin filament-based process; embryo development; and positive regulation of actin filament polymerization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06572
Corresponding_CDS_historyCBG06572:bp194
CBG06572:bp255
CBG06572a:bp264
CBG06572b:bp257
CBG06572b:bp264
Corresponding_transcriptCBG06572.1
Other_sequenceXIC00202_1
EX909981.1
EX014479.1
NAC00502_1
HGC00075_1
Tcol_isotig02270
MH01448
ES561384.1
NB08291
Tcir_isotig10860
Dviv_isotig09164
JI174385.1
RS07375
SR00358
JI176755.1
EX012319.1
Name_isotig00126
CBC04206_1
BU585903.1
TV00053
BE217612.1
PT04021
Name_isotig00124
GO249280.1
BM276569
HC00658
EX014545.1
SS03469
XI00911
OVC01247_1
Dviv_isotig18570
CR12250
MIC02397_1
MI02884
JI169215.1
TX00476
PTC00768_1
AYC03477_1
SSC02938_1
BU086921.1
Dviv_isotig09168
GRC00263_1
HBC01800_1
HG11102
TCC00423_1
EX501417.1
HBC01208_1
H39463.1
CRC04215_1
Dviv_isotig09167
GO251549.1
AE04299
Dviv_isotig09165
Name_isotig00125
AS15442
XI02851
FC818010.1
CGC01100_1
CB013214.1
MHC11528_1
DAC00378_1
Tcol_isotig07761
PT02790
PPC02245_1
ES566761.1
ASC38097_1
CR03817
JI473194.1
CK850821.1
MH05957
ES742222.1
EX501931.1
RSC02385_1
CBC03678_1
Tcol_isotig07762
XIC03599_1
ALC00371_1
HG03135
MJC00341_1
ACC15218_1
ES409140.1
XI01475
FC819277.1
EX915077.1
EX566672.1
JO467730.1
CRC11208_1
ES743401.1
EX915066.1
ACC01754_1
GP00944
FG588003.1
MH02631
Oden_isotig21706
GO251527.1
MIC08730_1
EX914433.1
EX014328.1
EY462591.1
CJC17758_1
PT04196
ACC00942_1
FC812981.1
FK806056.1
ES741085.1
WBC02080_1
RSC04125_1
EX911831.1
EX010504.1
MI09019
PP01516
AYC03205_1
BXC05715_1
BM276569.1
PTC03652_1
EX914507.1
MJC04442_1
HBC25086_1
PTC04758_1
BG467764.1
EX013897.1
CR02620
ES412371.1
EX915384.1
JI165457.1
DA00006
GR19865
JI468140.1
NBC02993_1
EX914287.1
EX010447.1
Hbac_contig01381
Acan_isotig12698
EX914699.1
EX014913.1
Dviv_isotig09171
FC818692.1
EX913369.1
CJC05370_1
XIC01183_1
TSC14853_1
GPC00068_1
ES743077.1
EX009086.1
FE912345.1
TMC01379_1
Tcol_isotig02269
PSC00239_1
EX008914.1
SS01043
MJ05046
PP02014
HCC03343_1
GRC01102_1
CJC01027_1
ES565406.1
HG08234
MHC00893_1
Dviv_isotig09169
JI472422.1
BG310583.1
MH09429
SSC02636_1
FG588759.1
JI470225.1
GW409741.1
AE03012
ES411959.1
HGC09294_1
AI692146.1
TSC11482_1
BXC00246_1
PT01734
GR367871.1
ES672770.1
Dviv_isotig09170
GPC01128_1
PTC04669_1
MIC00647_1
SRC03295_1
OVC03380_1
GP00414
Hbac_isotig04027
RS06152
MHC02952_1
Acan_isotig03352
GO252279.1
GR11562
HBC15063_1
GRC03483_1
PTC00164_1
GPC00459_1
PPC00511_1
ES742251.1
EX539535.1
NB07249
PT00920
ASC17429_1
Dviv_isotig09166
Oden_isotig20371
PT00723
GPC01018_1
Acan_isotig03353
TVC00246_1
MJ00155
PTC01147_1
NBC00056_1
MI00730
Experimental_infoExpr_patternExpr1059962
Construct_productWBCnstr00019199
Microarray_resultsGPL8303_CB6_WBGene00028830_A
GPL8303_CB6_WBGene00028830_B
GPL14143_CBG06572_449-508_0.914_3_B
GPL14143_CBG06572_575-634_0.932_1_A
GPL14143_CBG06572_672-731_0.894_10_C
ReferenceWBPaper00041641
MethodGene