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WormBase Tree Display for Gene: WBGene00026629

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Name Class

WBGene00026629SMapS_parentSequencecb25.fpc0071c2
IdentityVersion4
NameCGC_nameCbr-ztf-11From_analysisInferred_from_orthology
Sequence_nameCBG03854
Molecular_nameCBG03854
CBG03854.1
CBP43220
Other_nameCBG_03854Accession_evidenceNDBHE600906
Cbr-ekl-2From_analysisInferred_from_orthology
Public_nameCbr-ztf-11
DB_infoDatabaseNDBlocus_tagCBG_03854
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-ekl-2
324 Jul 2008 11:56:30WBPerson1847EventAcquires_mergeWBGene00026630
420 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbr-ztf-11
Other_nameCbr-ekl-2
Acquires_mergeWBGene00026630
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classztf
AlleleWBVar00017744
WBVar00017749
WBVar00017754
RNASeq_FPKMWBls:00000027.11653From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
7.40842From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.43872From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.79121From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
7.59981From_analysisRNASeq.briggsae.WBls:0000002.control_median
8.02561From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.7863From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000360.0529From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
71.2017From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
82.3504From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
65.9708From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
69.458From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000475.7412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
80.4688From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
85.1964From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
82.8113From_analysisRNASeq.briggsae.WBls:0000004.control_mean
83.1452From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
83.2674From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
86.7063From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.567926From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
11.1372From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.75454From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.81989From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.51234From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.27013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
4.68245From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000354.0637From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.771162From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.37776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.38549From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.39322From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.63769From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.00862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004113.0906From_analysisRNASeq.briggsae.WBls:0000041.control_mean
14.8681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
15.6756From_analysisRNASeq.briggsae.WBls:0000041.control_median
16.4831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
17.1108From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.90036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
10.1852From_analysisRNASeq.briggsae.WBls:0000041.control_median
10.4929From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.09284From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.50236From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.78566From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.31852From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.48986From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.49477From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.55181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.29855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.52329From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.86626From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.74825From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010115.5718From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.81481From_analysisRNASeq.briggsae.total_over_all_stages.control_median
21.0545From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.18655From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00130177
00130178
00130179
Contained_in_operonCBOPA0145
Ortholog (28)
ParalogWBGene00028964Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is an ortholog of C. elegans ztf-11. In C. elegans, ztf-11 is involved in several processes, including negative regulation of transcription by RNA polymerase II; neuron differentiation; and positive regulation of cell differentiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03854
Corresponding_CDS_historyCBG03854:bp194
CBG03854:bp255
Corresponding_transcriptCBG03854.1
Other_sequenceJI169553.1
Dviv_isotig18198
Dviv_isotig18199
Experimental_infoExpr_patternExpr1051052
Microarray_resultsGPL8303_CB6_WBGene00026629_A
GPL8303_CB6_WBGene00026629_B
GPL14143_CBG03854_1237-1296_0.878_17_C
GPL14143_CBG03854_1512-1571_0.576_214_B
GPL14143_CBG03854_1708-1767_0.836_37_A
MethodGene