WormBase Tree Display for Gene: WBGene00022196
expand all nodes | collapse all nodes | view schema
WBGene00022196 | SMap | S_parent | Sequence | Y71H2B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | gpa-17 | Person_evidence | WBPerson567 | |||||
Sequence_name | Y71H2B.7 | ||||||||
Molecular_name | Y71H2B.7 | ||||||||
Y71H2B.7.1 | |||||||||
CE24633 | |||||||||
Other_name | CELE_Y71H2B.7 | Accession_evidence | NDB | BX284603 | |||||
Public_name | gpa-17 | ||||||||
DB_info | Database | AceView | gene | 3D677 | |||||
WormQTL | gene | WBGene00022196 | |||||||
WormFlux | gene | WBGene00022196 | |||||||
NDB | locus_tag | CELE_Y71H2B.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00022196|UniProtKB=Q9N4F4 | |||||||
family | PTHR10218 | ||||||||
NCBI | gene | 175377 | |||||||
RefSeq | protein | NM_001381782.2 | |||||||
TrEMBL | UniProtAcc | Q9N4F4 | |||||||
UniProt_GCRP | UniProtAcc | Q9N4F4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 20 Dec 2006 12:23:23 | WBPerson567 | Name_change | CGC_name | gpa-17 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | gpa | ||||||||
Allele (63) | |||||||||
Strain | WBStrain00032491 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (14) | |||||||||
Ortholog (25) | |||||||||
Paralog (21) | |||||||||
Structured_description | Concise_description | gpa-17 encodes a divergent Gq alpha subunit paralogous to EGL-30; gpa-17 is reported to be expressed in intestine, but has no known function in vivo. | Paper_evidence | WBPaper00027698 | |||||
Person_evidence | WBPerson1685 | ||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 11 Dec 2006 00:00:00 | ||||||||
Automated_description | Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-activating dopamine receptor signaling pathway and sensory perception of chemical stimulus. Predicted to be part of heterotrimeric G-protein complex. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y71H2B.7 | |||||||
Corresponding_transcript | Y71H2B.7.1 | ||||||||
Other_sequence | Tcir_isotig20931 | ||||||||
Associated_feature | WBsf644987 | ||||||||
WBsf658699 | |||||||||
WBsf224531 | |||||||||
Experimental_info | RNAi_result | WBRNAi00058274 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00033248 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021374 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00058272 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00064974 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00000788 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020741 | ||||||||
Expr1039787 | |||||||||
Expr1161684 | |||||||||
Expr2012188 | |||||||||
Expr2030424 | |||||||||
Microarray_results (20) | |||||||||
Expression_cluster (146) | |||||||||
Map_info | Map | III | Position | -11.92 | Error | 0.116358 | |||
Positive | Positive_clone | Y71H2B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00031936 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |