WormBase Tree Display for Gene: WBGene00022196
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WBGene00022196 | SMap | S_parent | Sequence | Y71H2B | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | gpa-17 | Person_evidence | WBPerson567 | |||
Sequence_name | Y71H2B.7 | ||||||
Molecular_name | Y71H2B.7 | ||||||
Y71H2B.7.1 | |||||||
CE24633 | |||||||
Other_name | CELE_Y71H2B.7 | Accession_evidence | NDB | BX284603 | |||
Public_name | gpa-17 | ||||||
DB_info | Database | AceView | gene | 3D677 | |||
WormQTL | gene | WBGene00022196 | |||||
WormFlux | gene | WBGene00022196 | |||||
NDB | locus_tag | CELE_Y71H2B.7 | |||||
Panther | gene | CAEEL|WormBase=WBGene00022196|UniProtKB=Q9N4F4 | |||||
family | PTHR10218 | ||||||
NCBI | gene | 175377 | |||||
RefSeq | protein | NM_001381782.2 | |||||
TrEMBL | UniProtAcc | Q9N4F4 | |||||
UniProt_GCRP | UniProtAcc | Q9N4F4 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | gpa | ||||||
Allele (63) | |||||||
Strain | WBStrain00032491 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (14) | |||||||
Ortholog (25) | |||||||
Paralog (21) | |||||||
Structured_description | Concise_description | gpa-17 encodes a divergent Gq alpha subunit paralogous to EGL-30; gpa-17 is reported to be expressed in intestine, but has no known function in vivo. | Paper_evidence | WBPaper00027698 | |||
Person_evidence | WBPerson1685 | ||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 11 Dec 2006 00:00:00 | ||||||
Automated_description | Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-activating dopamine receptor signaling pathway and sensory perception of chemical stimulus. Predicted to be part of heterotrimeric G-protein complex. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y71H2B.7 | |||||
Corresponding_transcript | Y71H2B.7.1 | ||||||
Other_sequence | Tcir_isotig20931 | ||||||
Associated_feature | WBsf644987 | ||||||
WBsf658699 | |||||||
WBsf224531 | |||||||
Experimental_info | RNAi_result | WBRNAi00058274 | Inferred_automatically | RNAi_primary | |||
WBRNAi00033248 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00021374 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00058272 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00064974 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00000788 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1020741 | ||||||
Expr1039787 | |||||||
Expr1161684 | |||||||
Expr2012188 | |||||||
Expr2030424 | |||||||
Microarray_results (20) | |||||||
Expression_cluster (146) | |||||||
Map_info | Map | III | Position | -11.92 | Error | 0.116358 | |
Positive | Positive_clone | Y71H2B | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031936 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |