WormBase Tree Display for Gene: WBGene00021999
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WBGene00021999 | SMap | S_parent | Sequence | Y59E9AR | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | thn-5 | |||||||
Sequence_name | Y59E9AR.4 | ||||||||
Molecular_name | Y59E9AR.4 | ||||||||
Y59E9AR.4.1 | |||||||||
CE35126 | |||||||||
Other_name | CELE_Y59E9AR.4 | Accession_evidence | NDB | BX284604 | |||||
Public_name | thn-5 | ||||||||
DB_info | Database | AceView | gene | 4F997 | |||||
WormQTL | gene | WBGene00021999 | |||||||
WormFlux | gene | WBGene00021999 | |||||||
NDB | locus_tag | CELE_Y59E9AR.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021999|UniProtKB=Q9N326 | |||||||
family | PTHR31013 | ||||||||
NCBI | gene | 190420 | |||||||
RefSeq | protein | NM_068347.3 | |||||||
TREEFAM | TREEFAM_ID | TF315390 | |||||||
TrEMBL | UniProtAcc | Q9N326 | |||||||
UniProt_GCRP | UniProtAcc | Q9N326 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 25 Aug 2004 14:14:12 | WBPerson1971 | Name_change | CGC_name | thn-5 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | thn | ||||||||
Allele (25) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00093456 | ||||||||
00093457 | |||||||||
Ortholog (33) | |||||||||
Paralog | WBGene00009213 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00009214 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WBGene00009215 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00009858 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021992 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00022001 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
Structured_description | Automated_description | Predicted to be located in extracellular region. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y59E9AR.4 | |||||||
Corresponding_CDS_history | Y59E9AR.4:wp104 | ||||||||
Corresponding_transcript | Y59E9AR.4.1 | ||||||||
Other_sequence | FD516010.1 | ||||||||
CSC01708_1 | |||||||||
CBC00415_1 | |||||||||
CBC15130_1 | |||||||||
CBC00415_2 | |||||||||
Associated_feature | WBsf645962 | ||||||||
WBsf228275 | |||||||||
Experimental_info | RNAi_result | WBRNAi00021180 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037637 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00057777 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1023325 | ||||||||
Expr1161205 | |||||||||
Expr2035526 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (93) | |||||||||
Map_info | Map | IV | Position | 1.57779 | Error | 0.001067 | |||
Positive | Positive_clone | Y59E9AR | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |